listing git files failed - pretending there aren't any
warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip'
warning: no previously-included files matching '*.pyc' found anywhere in distribution
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '*.py{}' found anywhere in distribution
warning: no previously-included files matching '*.py-e' found anywhere in distribution
warning: no previously-included files found matching 'Bio/Align/substitution_matrices/data/README.txt'
Bio/cpairwise2module.c: In function ‘_get_match_score’:
Bio/cpairwise2module.c:60:5: warning: ‘PyEval_CallObjectWithKeywords’ is deprecated [-Wdeprecated-declarations]
   60 |     if(!(py_result = PyEval_CallObject(py_match_fn, py_arglist)))
      |     ^~
In file included from /usr/include/python3.9/Python.h:140,
                 from Bio/cpairwise2module.c:16:
/usr/include/python3.9/ceval.h:17:43: note: declared here
   17 | Py_DEPRECATED(3.9) PyAPI_FUNC(PyObject *) PyEval_CallObjectWithKeywords(
      |                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./
install/
install/slack-desc
usr/
usr/doc/
usr/doc/biopython-1.78/
usr/doc/biopython-1.78/CONTRIB.rst
usr/doc/biopython-1.78/CONTRIBUTING.rst
usr/doc/biopython-1.78/DEPRECATED.rst
usr/doc/biopython-1.78/LICENSE.rst
usr/doc/biopython-1.78/NEWS.rst
usr/doc/biopython-1.78/README.rst
usr/doc/biopython-1.78/References
usr/doc/biopython-1.78/biopython.SlackBuild
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biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-3-test.id
biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-20-test.id
biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-all-test.fa
biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-15-test.id
biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1,3-test.id
biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-20-test.id
biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-95-test.id
biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-25-test.id
biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-30-test.id
biopython-1.78/Tests/SCOP/raftest.txt
biopython-1.78/Tests/SCOP/dir.des.scop.txt_test
biopython-1.78/Tests/SCOP/dir.hie.scop.txt_test
biopython-1.78/Tests/test_PDB_MMCIF2Dict.py
biopython-1.78/Tests/CDAO/
biopython-1.78/Tests/CDAO/test.cdao
biopython-1.78/Tests/test_PDB_StructureAlignment.py
biopython-1.78/Tests/Xdna/
biopython-1.78/Tests/Xdna/sample-a.xdna
biopython-1.78/Tests/Xdna/sample-c.xprt
biopython-1.78/Tests/Xdna/sample-b.xdna
biopython-1.78/Tests/test_TCoffee_tool.py
biopython-1.78/Tests/test_MSAProbs_tool.py
biopython-1.78/Tests/.coveragerc
biopython-1.78/Tests/test_SearchIO_hmmer3_text_index.py
biopython-1.78/Tests/NBRF/
biopython-1.78/Tests/NBRF/clustalw.pir
biopython-1.78/Tests/NBRF/B_nuc.pir
biopython-1.78/Tests/NBRF/DMB_prot.pir
biopython-1.78/Tests/NBRF/DMA_nuc.pir
biopython-1.78/Tests/NBRF/Cw_prot.pir
biopython-1.78/Tests/test_SCOP_Raf.py
biopython-1.78/Tests/test_BioSQL_MySQLdb.py
biopython-1.78/Tests/BWA/
biopython-1.78/Tests/BWA/human_g1k_v37_truncated.fasta
biopython-1.78/Tests/BWA/HNSCC1_1_truncated.fastq
biopython-1.78/Tests/BWA/HNSCC1_2_truncated.fastq
biopython-1.78/Tests/test_phenotype_fit.py
biopython-1.78/Tests/test_PopGen_GenePop_nodepend.py
biopython-1.78/Tests/test_NCBITextParser.py
biopython-1.78/Tests/test_KeyWList.py
biopython-1.78/Tests/test_Phylo_matplotlib.py
biopython-1.78/Tests/test_ClustalOmega_tool.py
biopython-1.78/Tests/test_SCOP_Des.py
biopython-1.78/Tests/test_motifs_online.py
biopython-1.78/Tests/test_SearchIO_interproscan_xml.py
biopython-1.78/Tests/test_align.py
biopython-1.78/Tests/test_PDB_MMCIFParser.py
biopython-1.78/Tests/test_File.py
biopython-1.78/Tests/test_GenBank.py
biopython-1.78/Tests/Cellosaurus/
biopython-1.78/Tests/Cellosaurus/cell_lines_2.txt
biopython-1.78/Tests/Cellosaurus/cell_lines_1.txt
biopython-1.78/Tests/Cellosaurus/cell_lines_3.txt
biopython-1.78/Tests/test_BioSQL_sqlite3.py
biopython-1.78/Tests/test_KGML_nographics.py
biopython-1.78/Tests/Mauve/
biopython-1.78/Tests/Mauve/simple.xmfa
biopython-1.78/Tests/Mauve/simple.fa
biopython-1.78/Tests/Mauve/simple.xmfa.backbone
biopython-1.78/Tests/Mauve/simple_short.xmfa
biopython-1.78/Tests/Mauve/simple.xmfa.bbcols
biopython-1.78/Tests/test_SearchIO_blat_psl_index.py
biopython-1.78/Tests/test_SeqIO_write.py
biopython-1.78/Tests/test_Entrez_online.py
biopython-1.78/Tests/test_Mafft_tool.py
biopython-1.78/Tests/test_AlignIO_convert.py
biopython-1.78/Tests/test_SeqIO.py
biopython-1.78/Tests/test_PAML_yn00.py
biopython-1.78/Tests/test_KEGG_online.py
biopython-1.78/Tests/PhyloXML/
biopython-1.78/Tests/PhyloXML/bcl_2.xml
biopython-1.78/Tests/PhyloXML/phyloxml_examples.xml
biopython-1.78/Tests/PhyloXML/distribution.xml
biopython-1.78/Tests/PhyloXML/apaf.xml
biopython-1.78/Tests/PhyloXML/example.xml
biopython-1.78/Tests/PhyloXML/made_up.xml
biopython-1.78/Tests/PhyloXML/o_tol_332_d_dollo.xml
biopython-1.78/Tests/test_KEGG.py
biopython-1.78/Tests/test_PDB_SMCRA.py
biopython-1.78/Tests/Stockholm/
biopython-1.78/Tests/Stockholm/simple.sth
biopython-1.78/Tests/Stockholm/funny.sth
biopython-1.78/Tests/Wise/
biopython-1.78/Tests/Wise/human_114_g02_exons.fna_01
biopython-1.78/Tests/Wise/human_114_g01_exons.fna_01
biopython-1.78/Tests/test_Uniprot.py
biopython-1.78/Tests/test_EMBL_unittest.py
biopython-1.78/Tests/Nexus/
biopython-1.78/Tests/Nexus/vSysLab_Heptascelio_no-states_10+chars.nex
biopython-1.78/Tests/Nexus/int_node_labels.nwk
biopython-1.78/Tests/Nexus/bats.nex
biopython-1.78/Tests/Nexus/ByteOrderMarkFile.nwk
biopython-1.78/Tests/Nexus/test.new
biopython-1.78/Tests/Nexus/vSysLab_Ganaspidium_multistate.nex
biopython-1.78/Tests/Nexus/vSysLab_Oreiscelio_discrete+continuous.nex
biopython-1.78/Tests/Nexus/test_Nexus_input.nex
biopython-1.78/Tests/Nexus/codonposset.nex
biopython-1.78/Tests/test_Blast_Record.py
biopython-1.78/Tests/test_GraphicsChromosome.py
biopython-1.78/Tests/test_Restriction.py
biopython-1.78/Tests/test_PDB_PDBIO.py
biopython-1.78/LICENSE.rst
running install
running build
running build_py
creating build
creating build/lib.linux-x86_64-3.9
creating build/lib.linux-x86_64-3.9/Bio
copying Bio/_utils.py -> build/lib.linux-x86_64-3.9/Bio
copying Bio/kNN.py -> build/lib.linux-x86_64-3.9/Bio
copying Bio/bgzf.py -> build/lib.linux-x86_64-3.9/Bio
copying Bio/pairwise2.py -> build/lib.linux-x86_64-3.9/Bio
copying Bio/SeqFeature.py -> build/lib.linux-x86_64-3.9/Bio
copying Bio/__init__.py -> build/lib.linux-x86_64-3.9/Bio
copying Bio/MarkovModel.py -> build/lib.linux-x86_64-3.9/Bio
copying Bio/File.py -> build/lib.linux-x86_64-3.9/Bio
copying Bio/MaxEntropy.py -> build/lib.linux-x86_64-3.9/Bio
copying Bio/LogisticRegression.py -> build/lib.linux-x86_64-3.9/Bio
copying Bio/SeqRecord.py -> build/lib.linux-x86_64-3.9/Bio
copying Bio/Seq.py -> build/lib.linux-x86_64-3.9/Bio
copying Bio/NaiveBayes.py -> build/lib.linux-x86_64-3.9/Bio
creating build/lib.linux-x86_64-3.9/Bio/Affy
copying Bio/Affy/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Affy
copying Bio/Affy/CelFile.py -> build/lib.linux-x86_64-3.9/Bio/Affy
creating build/lib.linux-x86_64-3.9/Bio/Align
copying Bio/Align/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Align
copying Bio/Align/AlignInfo.py -> build/lib.linux-x86_64-3.9/Bio/Align
creating build/lib.linux-x86_64-3.9/Bio/Align/Applications
copying Bio/Align/Applications/_Mafft.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications
copying Bio/Align/Applications/_Dialign.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications
copying Bio/Align/Applications/_MSAProbs.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications
copying Bio/Align/Applications/_Clustalw.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications
copying Bio/Align/Applications/_Muscle.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications
copying Bio/Align/Applications/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications
copying Bio/Align/Applications/_ClustalOmega.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications
copying Bio/Align/Applications/_TCoffee.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications
copying Bio/Align/Applications/_Probcons.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications
copying Bio/Align/Applications/_Prank.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications
creating build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices
copying Bio/Align/substitution_matrices/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices
creating build/lib.linux-x86_64-3.9/Bio/AlignIO
copying Bio/AlignIO/NexusIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO
copying Bio/AlignIO/ClustalIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO
copying Bio/AlignIO/PhylipIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO
copying Bio/AlignIO/__init__.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO
copying Bio/AlignIO/EmbossIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO
copying Bio/AlignIO/FastaIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO
copying Bio/AlignIO/MauveIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO
copying Bio/AlignIO/StockholmIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO
copying Bio/AlignIO/MsfIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO
copying Bio/AlignIO/Interfaces.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO
copying Bio/AlignIO/MafIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO
creating build/lib.linux-x86_64-3.9/Bio/Alphabet
copying Bio/Alphabet/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Alphabet
creating build/lib.linux-x86_64-3.9/Bio/Application
copying Bio/Application/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Application
creating build/lib.linux-x86_64-3.9/Bio/Blast
copying Bio/Blast/Record.py -> build/lib.linux-x86_64-3.9/Bio/Blast
copying Bio/Blast/NCBIWWW.py -> build/lib.linux-x86_64-3.9/Bio/Blast
copying Bio/Blast/NCBIXML.py -> build/lib.linux-x86_64-3.9/Bio/Blast
copying Bio/Blast/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Blast
copying Bio/Blast/Applications.py -> build/lib.linux-x86_64-3.9/Bio/Blast
copying Bio/Blast/ParseBlastTable.py -> build/lib.linux-x86_64-3.9/Bio/Blast
creating build/lib.linux-x86_64-3.9/Bio/CAPS
copying Bio/CAPS/__init__.py -> build/lib.linux-x86_64-3.9/Bio/CAPS
creating build/lib.linux-x86_64-3.9/Bio/Cluster
copying Bio/Cluster/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Cluster
creating build/lib.linux-x86_64-3.9/Bio/codonalign
copying Bio/codonalign/__init__.py -> build/lib.linux-x86_64-3.9/Bio/codonalign
copying Bio/codonalign/codonalignment.py -> build/lib.linux-x86_64-3.9/Bio/codonalign
copying Bio/codonalign/codonseq.py -> build/lib.linux-x86_64-3.9/Bio/codonalign
copying Bio/codonalign/chisq.py -> build/lib.linux-x86_64-3.9/Bio/codonalign
creating build/lib.linux-x86_64-3.9/Bio/Compass
copying Bio/Compass/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Compass
creating build/lib.linux-x86_64-3.9/Bio/Crystal
copying Bio/Crystal/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Crystal
creating build/lib.linux-x86_64-3.9/Bio/Data
copying Bio/Data/CodonTable.py -> build/lib.linux-x86_64-3.9/Bio/Data
copying Bio/Data/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Data
copying Bio/Data/IUPACData.py -> build/lib.linux-x86_64-3.9/Bio/Data
copying Bio/Data/SCOPData.py -> build/lib.linux-x86_64-3.9/Bio/Data
creating build/lib.linux-x86_64-3.9/Bio/Emboss
copying Bio/Emboss/Primer3.py -> build/lib.linux-x86_64-3.9/Bio/Emboss
copying Bio/Emboss/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Emboss
copying Bio/Emboss/Applications.py -> build/lib.linux-x86_64-3.9/Bio/Emboss
copying Bio/Emboss/PrimerSearch.py -> build/lib.linux-x86_64-3.9/Bio/Emboss
creating build/lib.linux-x86_64-3.9/Bio/Entrez
copying Bio/Entrez/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Entrez
copying Bio/Entrez/Parser.py -> build/lib.linux-x86_64-3.9/Bio/Entrez
creating build/lib.linux-x86_64-3.9/Bio/ExPASy
copying Bio/ExPASy/Prosite.py -> build/lib.linux-x86_64-3.9/Bio/ExPASy
copying Bio/ExPASy/ScanProsite.py -> build/lib.linux-x86_64-3.9/Bio/ExPASy
copying Bio/ExPASy/__init__.py -> build/lib.linux-x86_64-3.9/Bio/ExPASy
copying Bio/ExPASy/Enzyme.py -> build/lib.linux-x86_64-3.9/Bio/ExPASy
copying Bio/ExPASy/Prodoc.py -> build/lib.linux-x86_64-3.9/Bio/ExPASy
copying Bio/ExPASy/cellosaurus.py -> build/lib.linux-x86_64-3.9/Bio/ExPASy
creating build/lib.linux-x86_64-3.9/Bio/FSSP
copying Bio/FSSP/fssp_rec.py -> build/lib.linux-x86_64-3.9/Bio/FSSP
copying Bio/FSSP/__init__.py -> build/lib.linux-x86_64-3.9/Bio/FSSP
copying Bio/FSSP/FSSPTools.py -> build/lib.linux-x86_64-3.9/Bio/FSSP
creating build/lib.linux-x86_64-3.9/Bio/GenBank
copying Bio/GenBank/Record.py -> build/lib.linux-x86_64-3.9/Bio/GenBank
copying Bio/GenBank/__init__.py -> build/lib.linux-x86_64-3.9/Bio/GenBank
copying Bio/GenBank/Scanner.py -> build/lib.linux-x86_64-3.9/Bio/GenBank
copying Bio/GenBank/utils.py -> build/lib.linux-x86_64-3.9/Bio/GenBank
creating build/lib.linux-x86_64-3.9/Bio/Geo
copying Bio/Geo/Record.py -> build/lib.linux-x86_64-3.9/Bio/Geo
copying Bio/Geo/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Geo
creating build/lib.linux-x86_64-3.9/Bio/Graphics
copying Bio/Graphics/BasicChromosome.py -> build/lib.linux-x86_64-3.9/Bio/Graphics
copying Bio/Graphics/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Graphics
copying Bio/Graphics/KGML_vis.py -> build/lib.linux-x86_64-3.9/Bio/Graphics
copying Bio/Graphics/DisplayRepresentation.py -> build/lib.linux-x86_64-3.9/Bio/Graphics
copying Bio/Graphics/ColorSpiral.py -> build/lib.linux-x86_64-3.9/Bio/Graphics
copying Bio/Graphics/Distribution.py -> build/lib.linux-x86_64-3.9/Bio/Graphics
copying Bio/Graphics/Comparative.py -> build/lib.linux-x86_64-3.9/Bio/Graphics
creating build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_Graph.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_Colors.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_Track.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_Diagram.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_Feature.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram
creating build/lib.linux-x86_64-3.9/Bio/HMM
copying Bio/HMM/DynamicProgramming.py -> build/lib.linux-x86_64-3.9/Bio/HMM
copying Bio/HMM/Utilities.py -> build/lib.linux-x86_64-3.9/Bio/HMM
copying Bio/HMM/Trainer.py -> build/lib.linux-x86_64-3.9/Bio/HMM
copying Bio/HMM/__init__.py -> build/lib.linux-x86_64-3.9/Bio/HMM
copying Bio/HMM/MarkovModel.py -> build/lib.linux-x86_64-3.9/Bio/HMM
creating build/lib.linux-x86_64-3.9/Bio/KEGG
copying Bio/KEGG/__init__.py -> build/lib.linux-x86_64-3.9/Bio/KEGG
copying Bio/KEGG/REST.py -> build/lib.linux-x86_64-3.9/Bio/KEGG
creating build/lib.linux-x86_64-3.9/Bio/KEGG/Compound
copying Bio/KEGG/Compound/__init__.py -> build/lib.linux-x86_64-3.9/Bio/KEGG/Compound
creating build/lib.linux-x86_64-3.9/Bio/KEGG/Enzyme
copying Bio/KEGG/Enzyme/__init__.py -> build/lib.linux-x86_64-3.9/Bio/KEGG/Enzyme
creating build/lib.linux-x86_64-3.9/Bio/KEGG/Gene
copying Bio/KEGG/Gene/__init__.py -> build/lib.linux-x86_64-3.9/Bio/KEGG/Gene
creating build/lib.linux-x86_64-3.9/Bio/KEGG/Map
copying Bio/KEGG/Map/__init__.py -> build/lib.linux-x86_64-3.9/Bio/KEGG/Map
creating build/lib.linux-x86_64-3.9/Bio/PDB
creating build/lib.linux-x86_64-3.9/Bio/PDB/mmtf
copying Bio/PDB/mmtf/__init__.py -> build/lib.linux-x86_64-3.9/Bio/PDB/mmtf
copying Bio/PDB/mmtf/mmtfio.py -> build/lib.linux-x86_64-3.9/Bio/PDB/mmtf
copying Bio/PDB/mmtf/DefaultParser.py -> build/lib.linux-x86_64-3.9/Bio/PDB/mmtf
creating build/lib.linux-x86_64-3.9/Bio/KEGG/KGML
copying Bio/KEGG/KGML/KGML_pathway.py -> build/lib.linux-x86_64-3.9/Bio/KEGG/KGML
copying Bio/KEGG/KGML/__init__.py -> build/lib.linux-x86_64-3.9/Bio/KEGG/KGML
copying Bio/KEGG/KGML/KGML_parser.py -> build/lib.linux-x86_64-3.9/Bio/KEGG/KGML
creating build/lib.linux-x86_64-3.9/Bio/Medline
copying Bio/Medline/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Medline
creating build/lib.linux-x86_64-3.9/Bio/motifs
copying Bio/motifs/clusterbuster.py -> build/lib.linux-x86_64-3.9/Bio/motifs
copying Bio/motifs/pfm.py -> build/lib.linux-x86_64-3.9/Bio/motifs
copying Bio/motifs/transfac.py -> build/lib.linux-x86_64-3.9/Bio/motifs
copying Bio/motifs/__init__.py -> build/lib.linux-x86_64-3.9/Bio/motifs
copying Bio/motifs/minimal.py -> build/lib.linux-x86_64-3.9/Bio/motifs
copying Bio/motifs/meme.py -> build/lib.linux-x86_64-3.9/Bio/motifs
copying Bio/motifs/thresholds.py -> build/lib.linux-x86_64-3.9/Bio/motifs
copying Bio/motifs/xms.py -> build/lib.linux-x86_64-3.9/Bio/motifs
copying Bio/motifs/mast.py -> build/lib.linux-x86_64-3.9/Bio/motifs
copying Bio/motifs/matrix.py -> build/lib.linux-x86_64-3.9/Bio/motifs
copying Bio/motifs/alignace.py -> build/lib.linux-x86_64-3.9/Bio/motifs
creating build/lib.linux-x86_64-3.9/Bio/motifs/applications
copying Bio/motifs/applications/__init__.py -> build/lib.linux-x86_64-3.9/Bio/motifs/applications
copying Bio/motifs/applications/_xxmotif.py -> build/lib.linux-x86_64-3.9/Bio/motifs/applications
creating build/lib.linux-x86_64-3.9/Bio/motifs/jaspar
copying Bio/motifs/jaspar/__init__.py -> build/lib.linux-x86_64-3.9/Bio/motifs/jaspar
copying Bio/motifs/jaspar/db.py -> build/lib.linux-x86_64-3.9/Bio/motifs/jaspar
creating build/lib.linux-x86_64-3.9/Bio/Nexus
copying Bio/Nexus/StandardData.py -> build/lib.linux-x86_64-3.9/Bio/Nexus
copying Bio/Nexus/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Nexus
copying Bio/Nexus/Nexus.py -> build/lib.linux-x86_64-3.9/Bio/Nexus
copying Bio/Nexus/Trees.py -> build/lib.linux-x86_64-3.9/Bio/Nexus
copying Bio/Nexus/Nodes.py -> build/lib.linux-x86_64-3.9/Bio/Nexus
creating build/lib.linux-x86_64-3.9/Bio/NMR
copying Bio/NMR/__init__.py -> build/lib.linux-x86_64-3.9/Bio/NMR
copying Bio/NMR/xpktools.py -> build/lib.linux-x86_64-3.9/Bio/NMR
copying Bio/NMR/NOEtools.py -> build/lib.linux-x86_64-3.9/Bio/NMR
creating build/lib.linux-x86_64-3.9/Bio/Pathway
copying Bio/Pathway/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Pathway
creating build/lib.linux-x86_64-3.9/Bio/Pathway/Rep
copying Bio/Pathway/Rep/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Pathway/Rep
copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.linux-x86_64-3.9/Bio/Pathway/Rep
copying Bio/Pathway/Rep/Graph.py -> build/lib.linux-x86_64-3.9/Bio/Pathway/Rep
copying Bio/PDB/PDBList.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/HSExposure.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/NeighborSearch.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/vectors.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/PDBParser.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/__init__.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/Selection.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/Dice.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/FragmentMapper.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/Polypeptide.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/Structure.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/AbstractPropertyMap.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/ic_data.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/Entity.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/DSSP.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/ResidueDepth.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/PICIO.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/Model.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/internal_coords.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/Chain.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/parse_pdb_header.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/PDBIO.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/ic_rebuild.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/StructureBuilder.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/PSEA.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/Residue.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/StructureAlignment.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/MMCIFParser.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/NACCESS.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/MMCIF2Dict.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/Superimposer.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/SCADIO.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/PDBExceptions.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/Atom.py -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/mmcifio.py -> build/lib.linux-x86_64-3.9/Bio/PDB
creating build/lib.linux-x86_64-3.9/Bio/phenotype
copying Bio/phenotype/phen_micro.py -> build/lib.linux-x86_64-3.9/Bio/phenotype
copying Bio/phenotype/__init__.py -> build/lib.linux-x86_64-3.9/Bio/phenotype
copying Bio/phenotype/pm_fitting.py -> build/lib.linux-x86_64-3.9/Bio/phenotype
creating build/lib.linux-x86_64-3.9/Bio/PopGen
copying Bio/PopGen/__init__.py -> build/lib.linux-x86_64-3.9/Bio/PopGen
creating build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop
copying Bio/PopGen/GenePop/__init__.py -> build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop
copying Bio/PopGen/GenePop/LargeFileParser.py -> build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop
copying Bio/PopGen/GenePop/EasyController.py -> build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop
copying Bio/PopGen/GenePop/FileParser.py -> build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop
copying Bio/PopGen/GenePop/Controller.py -> build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop
creating build/lib.linux-x86_64-3.9/Bio/Restriction
copying Bio/Restriction/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Restriction
copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.linux-x86_64-3.9/Bio/Restriction
copying Bio/Restriction/PrintFormat.py -> build/lib.linux-x86_64-3.9/Bio/Restriction
copying Bio/Restriction/Restriction.py -> build/lib.linux-x86_64-3.9/Bio/Restriction
creating build/lib.linux-x86_64-3.9/Bio/SCOP
copying Bio/SCOP/Hie.py -> build/lib.linux-x86_64-3.9/Bio/SCOP
copying Bio/SCOP/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SCOP
copying Bio/SCOP/Des.py -> build/lib.linux-x86_64-3.9/Bio/SCOP
copying Bio/SCOP/Raf.py -> build/lib.linux-x86_64-3.9/Bio/SCOP
copying Bio/SCOP/Dom.py -> build/lib.linux-x86_64-3.9/Bio/SCOP
copying Bio/SCOP/Residues.py -> build/lib.linux-x86_64-3.9/Bio/SCOP
copying Bio/SCOP/Cla.py -> build/lib.linux-x86_64-3.9/Bio/SCOP
creating build/lib.linux-x86_64-3.9/Bio/SearchIO
copying Bio/SearchIO/_utils.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO
copying Bio/SearchIO/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO
copying Bio/SearchIO/_index.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO
copying Bio/SearchIO/FastaIO.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO
copying Bio/SearchIO/BlatIO.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO
creating build/lib.linux-x86_64-3.9/Bio/SearchIO/_legacy
copying Bio/SearchIO/_legacy/ParserSupport.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/_legacy
copying Bio/SearchIO/_legacy/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/_legacy
copying Bio/SearchIO/_legacy/NCBIStandalone.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/_legacy
creating build/lib.linux-x86_64-3.9/Bio/SearchIO/_model
copying Bio/SearchIO/_model/hit.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/_model
copying Bio/SearchIO/_model/query.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/_model
copying Bio/SearchIO/_model/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/_model
copying Bio/SearchIO/_model/_base.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/_model
copying Bio/SearchIO/_model/hsp.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/_model
creating build/lib.linux-x86_64-3.9/Bio/SearchIO/BlastIO
copying Bio/SearchIO/BlastIO/blast_text.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/BlastIO
copying Bio/SearchIO/BlastIO/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/BlastIO
copying Bio/SearchIO/BlastIO/blast_tab.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/BlastIO
copying Bio/SearchIO/BlastIO/blast_xml.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/BlastIO
creating build/lib.linux-x86_64-3.9/Bio/SearchIO/HHsuiteIO
copying Bio/SearchIO/HHsuiteIO/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/HHsuiteIO
copying Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/HHsuiteIO
creating build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO
copying Bio/SearchIO/HmmerIO/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO
copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO
copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO
copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO
copying Bio/SearchIO/HmmerIO/_base.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO
copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO
creating build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO
copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO
copying Bio/SearchIO/ExonerateIO/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO
copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO
copying Bio/SearchIO/ExonerateIO/_base.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO
copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO
creating build/lib.linux-x86_64-3.9/Bio/SearchIO/InterproscanIO
copying Bio/SearchIO/InterproscanIO/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/InterproscanIO
copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/InterproscanIO
creating build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/XdnaIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/SwissIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/AbiIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/GckIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/SffIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/PirIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/IgIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/UniprotIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/TabIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/NibIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/InsdcIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/QualityIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/_index.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/PdbIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/SeqXmlIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/AceIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/FastaIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/PhdIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/SnapGeneIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
copying Bio/SeqIO/Interfaces.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO
creating build/lib.linux-x86_64-3.9/Bio/SeqUtils
copying Bio/SeqUtils/CodonUsage.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils
copying Bio/SeqUtils/CheckSum.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils
copying Bio/SeqUtils/ProtParamData.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils
copying Bio/SeqUtils/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils
copying Bio/SeqUtils/MeltingTemp.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils
copying Bio/SeqUtils/ProtParam.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils
copying Bio/SeqUtils/CodonUsageIndices.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils
copying Bio/SeqUtils/lcc.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils
copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils
creating build/lib.linux-x86_64-3.9/Bio/Sequencing
copying Bio/Sequencing/Ace.py -> build/lib.linux-x86_64-3.9/Bio/Sequencing
copying Bio/Sequencing/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Sequencing
copying Bio/Sequencing/Phd.py -> build/lib.linux-x86_64-3.9/Bio/Sequencing
creating build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications
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copying Bio/Sequencing/Applications/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications
copying Bio/Sequencing/Applications/_samtools.py -> build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications
copying Bio/Sequencing/Applications/_bwa.py -> build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications
creating build/lib.linux-x86_64-3.9/Bio/Statistics
copying Bio/Statistics/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Statistics
copying Bio/Statistics/lowess.py -> build/lib.linux-x86_64-3.9/Bio/Statistics
creating build/lib.linux-x86_64-3.9/Bio/SubsMat
copying Bio/SubsMat/FreqTable.py -> build/lib.linux-x86_64-3.9/Bio/SubsMat
copying Bio/SubsMat/MatrixInfo.py -> build/lib.linux-x86_64-3.9/Bio/SubsMat
copying Bio/SubsMat/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SubsMat
creating build/lib.linux-x86_64-3.9/Bio/SVDSuperimposer
copying Bio/SVDSuperimposer/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SVDSuperimposer
creating build/lib.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer
copying Bio/PDB/QCPSuperimposer/__init__.py -> build/lib.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer
creating build/lib.linux-x86_64-3.9/Bio/SwissProt
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copying Bio/SwissProt/KeyWList.py -> build/lib.linux-x86_64-3.9/Bio/SwissProt
creating build/lib.linux-x86_64-3.9/Bio/TogoWS
copying Bio/TogoWS/__init__.py -> build/lib.linux-x86_64-3.9/Bio/TogoWS
creating build/lib.linux-x86_64-3.9/Bio/Phylo
copying Bio/Phylo/_utils.py -> build/lib.linux-x86_64-3.9/Bio/Phylo
copying Bio/Phylo/NexusIO.py -> build/lib.linux-x86_64-3.9/Bio/Phylo
copying Bio/Phylo/Newick.py -> build/lib.linux-x86_64-3.9/Bio/Phylo
copying Bio/Phylo/BaseTree.py -> build/lib.linux-x86_64-3.9/Bio/Phylo
copying Bio/Phylo/NeXMLIO.py -> build/lib.linux-x86_64-3.9/Bio/Phylo
copying Bio/Phylo/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Phylo
copying Bio/Phylo/NeXML.py -> build/lib.linux-x86_64-3.9/Bio/Phylo
copying Bio/Phylo/PhyloXMLIO.py -> build/lib.linux-x86_64-3.9/Bio/Phylo
copying Bio/Phylo/_io.py -> build/lib.linux-x86_64-3.9/Bio/Phylo
copying Bio/Phylo/CDAOIO.py -> build/lib.linux-x86_64-3.9/Bio/Phylo
copying Bio/Phylo/CDAO.py -> build/lib.linux-x86_64-3.9/Bio/Phylo
copying Bio/Phylo/NewickIO.py -> build/lib.linux-x86_64-3.9/Bio/Phylo
copying Bio/Phylo/_cdao_owl.py -> build/lib.linux-x86_64-3.9/Bio/Phylo
copying Bio/Phylo/TreeConstruction.py -> build/lib.linux-x86_64-3.9/Bio/Phylo
copying Bio/Phylo/PhyloXML.py -> build/lib.linux-x86_64-3.9/Bio/Phylo
copying Bio/Phylo/Consensus.py -> build/lib.linux-x86_64-3.9/Bio/Phylo
creating build/lib.linux-x86_64-3.9/Bio/Phylo/Applications
copying Bio/Phylo/Applications/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/Applications
copying Bio/Phylo/Applications/_Fasttree.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/Applications
copying Bio/Phylo/Applications/_Phyml.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/Applications
copying Bio/Phylo/Applications/_Raxml.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/Applications
creating build/lib.linux-x86_64-3.9/Bio/Phylo/PAML
copying Bio/Phylo/PAML/yn00.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML
copying Bio/Phylo/PAML/baseml.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML
copying Bio/Phylo/PAML/_parse_codeml.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML
copying Bio/Phylo/PAML/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML
copying Bio/Phylo/PAML/_parse_yn00.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML
copying Bio/Phylo/PAML/_paml.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML
copying Bio/Phylo/PAML/chi2.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML
copying Bio/Phylo/PAML/codeml.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML
copying Bio/Phylo/PAML/_parse_baseml.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML
creating build/lib.linux-x86_64-3.9/Bio/UniGene
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creating build/lib.linux-x86_64-3.9/Bio/UniProt
copying Bio/UniProt/__init__.py -> build/lib.linux-x86_64-3.9/Bio/UniProt
copying Bio/UniProt/GOA.py -> build/lib.linux-x86_64-3.9/Bio/UniProt
creating build/lib.linux-x86_64-3.9/Bio/Wise
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copying Bio/Wise/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Wise
copying Bio/Wise/psw.py -> build/lib.linux-x86_64-3.9/Bio/Wise
creating build/lib.linux-x86_64-3.9/BioSQL
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copying BioSQL/__init__.py -> build/lib.linux-x86_64-3.9/BioSQL
copying BioSQL/Loader.py -> build/lib.linux-x86_64-3.9/BioSQL
copying BioSQL/BioSeq.py -> build/lib.linux-x86_64-3.9/BioSQL
copying BioSQL/BioSeqDatabase.py -> build/lib.linux-x86_64-3.9/BioSQL
running egg_info
writing biopython.egg-info/PKG-INFO
writing dependency_links to biopython.egg-info/dependency_links.txt
writing requirements to biopython.egg-info/requires.txt
writing top-level names to biopython.egg-info/top_level.txt
reading manifest file 'biopython.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.rst'
writing manifest file 'biopython.egg-info/SOURCES.txt'
copying Bio/cpairwise2module.c -> build/lib.linux-x86_64-3.9/Bio
copying Bio/Align/_aligners.c -> build/lib.linux-x86_64-3.9/Bio/Align
creating build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BENNER22 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BENNER6 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BENNER74 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLOSUM45 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLOSUM50 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLOSUM62 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLOSUM80 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLOSUM90 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/DAYHOFF -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/FENG -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/GENETIC -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/GONNET1992 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/HOXD70 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/JOHNSON -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/JONES -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/LEVIN -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/MCLACHLAN -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/MDM78 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/NUC.4.4 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/PAM250 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/PAM30 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/PAM70 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/RAO -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/RISLER -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/SCHNEIDER -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/STR -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/TRANS -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data
copying Bio/Cluster/cluster.c -> build/lib.linux-x86_64-3.9/Bio/Cluster
copying Bio/Cluster/cluster.h -> build/lib.linux-x86_64-3.9/Bio/Cluster
copying Bio/Cluster/clustermodule.c -> build/lib.linux-x86_64-3.9/Bio/Cluster
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copying Bio/Entrez/DTDs/isoamsn.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isoamso.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isoamsr.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isobox.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isocyr1.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isocyr2.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isodia.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isogrk1.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isogrk2.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isogrk3.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isogrk4.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isolat1.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isolat2.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isomfrk.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isomopf.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isomscr.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isonum.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isopub.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isotech.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/journalmeta.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/link.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/list.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/math.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathml2.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathml3-qname1.mod -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathml3.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathmlsetup.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mmlalias.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mmlextra.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/modules.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/notat.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/para.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/phrase.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pmc-1.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_020114.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_090101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_100101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_100301.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_110101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_120101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_130101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_130501.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_140101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_150101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_180101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_180601.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_190101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/references.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/section.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/xmlspecchars.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs
creating build/lib.linux-x86_64-3.9/Bio/Entrez/XSDs
copying Bio/Entrez/XSDs/IPGReportSet.xsd -> build/lib.linux-x86_64-3.9/Bio/Entrez/XSDs
copying Bio/motifs/_pwm.c -> build/lib.linux-x86_64-3.9/Bio/motifs
copying Bio/Nexus/cnexus.c -> build/lib.linux-x86_64-3.9/Bio/Nexus
copying Bio/PDB/kdtrees.c -> build/lib.linux-x86_64-3.9/Bio/PDB
copying Bio/PDB/QCPSuperimposer/qcprotmodule.c -> build/lib.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer
running build_ext
building 'Bio.Align._aligners' extension
creating build/temp.linux-x86_64-3.9
creating build/temp.linux-x86_64-3.9/Bio
creating build/temp.linux-x86_64-3.9/Bio/Align
gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/usr/include/python3.9 -c Bio/Align/_aligners.c -o build/temp.linux-x86_64-3.9/Bio/Align/_aligners.o
gcc -pthread -shared build/temp.linux-x86_64-3.9/Bio/Align/_aligners.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/Bio/Align/_aligners.cpython-39-x86_64-linux-gnu.so
building 'Bio.cpairwise2' extension
gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/usr/include/python3.9 -c Bio/cpairwise2module.c -o build/temp.linux-x86_64-3.9/Bio/cpairwise2module.o
gcc -pthread -shared build/temp.linux-x86_64-3.9/Bio/cpairwise2module.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/Bio/cpairwise2.cpython-39-x86_64-linux-gnu.so
building 'Bio.Nexus.cnexus' extension
creating build/temp.linux-x86_64-3.9/Bio/Nexus
gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/usr/include/python3.9 -c Bio/Nexus/cnexus.c -o build/temp.linux-x86_64-3.9/Bio/Nexus/cnexus.o
gcc -pthread -shared build/temp.linux-x86_64-3.9/Bio/Nexus/cnexus.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/Bio/Nexus/cnexus.cpython-39-x86_64-linux-gnu.so
building 'Bio.PDB.QCPSuperimposer.qcprotmodule' extension
creating build/temp.linux-x86_64-3.9/Bio/PDB
creating build/temp.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer
gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/usr/include/python3.9 -c Bio/PDB/QCPSuperimposer/qcprotmodule.c -o build/temp.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer/qcprotmodule.o
gcc -pthread -shared build/temp.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer/qcprotmodule.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-39-x86_64-linux-gnu.so
building 'Bio.motifs._pwm' extension
creating build/temp.linux-x86_64-3.9/Bio/motifs
gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/usr/include/python3.9 -c Bio/motifs/_pwm.c -o build/temp.linux-x86_64-3.9/Bio/motifs/_pwm.o
gcc -pthread -shared build/temp.linux-x86_64-3.9/Bio/motifs/_pwm.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/Bio/motifs/_pwm.cpython-39-x86_64-linux-gnu.so
building 'Bio.Cluster._cluster' extension
creating build/temp.linux-x86_64-3.9/Bio/Cluster
gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/usr/include/python3.9 -c Bio/Cluster/cluster.c -o build/temp.linux-x86_64-3.9/Bio/Cluster/cluster.o
gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/usr/include/python3.9 -c Bio/Cluster/clustermodule.c -o build/temp.linux-x86_64-3.9/Bio/Cluster/clustermodule.o
gcc -pthread -shared build/temp.linux-x86_64-3.9/Bio/Cluster/cluster.o build/temp.linux-x86_64-3.9/Bio/Cluster/clustermodule.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/Bio/Cluster/_cluster.cpython-39-x86_64-linux-gnu.so
building 'Bio.PDB.kdtrees' extension
gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/usr/include/python3.9 -c Bio/PDB/kdtrees.c -o build/temp.linux-x86_64-3.9/Bio/PDB/kdtrees.o
gcc -pthread -shared build/temp.linux-x86_64-3.9/Bio/PDB/kdtrees.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/Bio/PDB/kdtrees.cpython-39-x86_64-linux-gnu.so
running install_lib
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio
copying build/lib.linux-x86_64-3.9/Bio/_utils.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio
copying build/lib.linux-x86_64-3.9/Bio/kNN.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio
copying build/lib.linux-x86_64-3.9/Bio/bgzf.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio
copying build/lib.linux-x86_64-3.9/Bio/pairwise2.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio
copying build/lib.linux-x86_64-3.9/Bio/SeqFeature.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio
copying build/lib.linux-x86_64-3.9/Bio/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio
copying build/lib.linux-x86_64-3.9/Bio/MarkovModel.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio
copying build/lib.linux-x86_64-3.9/Bio/File.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio
copying build/lib.linux-x86_64-3.9/Bio/MaxEntropy.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio
copying build/lib.linux-x86_64-3.9/Bio/LogisticRegression.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio
copying build/lib.linux-x86_64-3.9/Bio/SeqRecord.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio
copying build/lib.linux-x86_64-3.9/Bio/Seq.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio
copying build/lib.linux-x86_64-3.9/Bio/NaiveBayes.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Affy
copying build/lib.linux-x86_64-3.9/Bio/Affy/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Affy
copying build/lib.linux-x86_64-3.9/Bio/Affy/CelFile.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Affy
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align
copying build/lib.linux-x86_64-3.9/Bio/Align/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align
copying build/lib.linux-x86_64-3.9/Bio/Align/AlignInfo.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications
copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_Mafft.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications
copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_Dialign.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications
copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_MSAProbs.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications
copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_Clustalw.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications
copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_Muscle.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications
copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications
copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_ClustalOmega.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications
copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_TCoffee.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications
copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_Probcons.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications
copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_Prank.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/BENNER22 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/BENNER6 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/BENNER74 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/BLOSUM45 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/BLOSUM50 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/BLOSUM62 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/BLOSUM80 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/BLOSUM90 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/DAYHOFF -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/FENG -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/GENETIC -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/GONNET1992 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/HOXD70 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/JOHNSON -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/JONES -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/LEVIN -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/MCLACHLAN -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/MDM78 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/NUC.4.4 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/PAM250 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/PAM30 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/PAM70 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/RAO -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/RISLER -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/SCHNEIDER -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/STR -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/TRANS -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data
copying build/lib.linux-x86_64-3.9/Bio/Align/_aligners.c -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align
copying build/lib.linux-x86_64-3.9/Bio/Align/_aligners.cpython-39-x86_64-linux-gnu.so -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO
copying build/lib.linux-x86_64-3.9/Bio/AlignIO/NexusIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO
copying build/lib.linux-x86_64-3.9/Bio/AlignIO/ClustalIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO
copying build/lib.linux-x86_64-3.9/Bio/AlignIO/PhylipIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO
copying build/lib.linux-x86_64-3.9/Bio/AlignIO/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO
copying build/lib.linux-x86_64-3.9/Bio/AlignIO/EmbossIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO
copying build/lib.linux-x86_64-3.9/Bio/AlignIO/FastaIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO
copying build/lib.linux-x86_64-3.9/Bio/AlignIO/MauveIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO
copying build/lib.linux-x86_64-3.9/Bio/AlignIO/StockholmIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO
copying build/lib.linux-x86_64-3.9/Bio/AlignIO/MsfIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO
copying build/lib.linux-x86_64-3.9/Bio/AlignIO/Interfaces.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO
copying build/lib.linux-x86_64-3.9/Bio/AlignIO/MafIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Alphabet
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Application
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast
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copying build/lib.linux-x86_64-3.9/Bio/Blast/NCBIWWW.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast
copying build/lib.linux-x86_64-3.9/Bio/Blast/NCBIXML.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast
copying build/lib.linux-x86_64-3.9/Bio/Blast/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast
copying build/lib.linux-x86_64-3.9/Bio/Blast/Applications.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast
copying build/lib.linux-x86_64-3.9/Bio/Blast/ParseBlastTable.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/CAPS
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Cluster
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copying build/lib.linux-x86_64-3.9/Bio/Cluster/cluster.h -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Cluster
copying build/lib.linux-x86_64-3.9/Bio/Cluster/clustermodule.c -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Cluster
copying build/lib.linux-x86_64-3.9/Bio/Cluster/_cluster.cpython-39-x86_64-linux-gnu.so -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Cluster
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/codonalign
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copying build/lib.linux-x86_64-3.9/Bio/codonalign/codonalignment.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/codonalign
copying build/lib.linux-x86_64-3.9/Bio/codonalign/codonseq.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/codonalign
copying build/lib.linux-x86_64-3.9/Bio/codonalign/chisq.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/codonalign
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Compass
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Crystal
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Data
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copying build/lib.linux-x86_64-3.9/Bio/Data/IUPACData.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Data
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Emboss
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copying build/lib.linux-x86_64-3.9/Bio/Emboss/PrimerSearch.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Emboss
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs
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copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_100301.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs
copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_110101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs
copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_120101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs
copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_130101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs
copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_130501.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs
copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_140101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs
copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_150101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs
copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_180101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs
copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_180601.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs
copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_190101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs
copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/references.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs
copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/section.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs
copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/taxon.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs
copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/xmlspecchars.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/XSDs
copying build/lib.linux-x86_64-3.9/Bio/Entrez/XSDs/IPGReportSet.xsd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/XSDs
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy
copying build/lib.linux-x86_64-3.9/Bio/ExPASy/Prosite.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy
copying build/lib.linux-x86_64-3.9/Bio/ExPASy/ScanProsite.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy
copying build/lib.linux-x86_64-3.9/Bio/ExPASy/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy
copying build/lib.linux-x86_64-3.9/Bio/ExPASy/Enzyme.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy
copying build/lib.linux-x86_64-3.9/Bio/ExPASy/Prodoc.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy
copying build/lib.linux-x86_64-3.9/Bio/ExPASy/cellosaurus.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/FSSP
copying build/lib.linux-x86_64-3.9/Bio/FSSP/fssp_rec.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/FSSP
copying build/lib.linux-x86_64-3.9/Bio/FSSP/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/FSSP
copying build/lib.linux-x86_64-3.9/Bio/FSSP/FSSPTools.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/FSSP
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/GenBank
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copying build/lib.linux-x86_64-3.9/Bio/GenBank/Scanner.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/GenBank
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Geo
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copying build/lib.linux-x86_64-3.9/Bio/Geo/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Geo
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics
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copying build/lib.linux-x86_64-3.9/Bio/Graphics/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics
copying build/lib.linux-x86_64-3.9/Bio/Graphics/KGML_vis.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics
copying build/lib.linux-x86_64-3.9/Bio/Graphics/DisplayRepresentation.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics
copying build/lib.linux-x86_64-3.9/Bio/Graphics/ColorSpiral.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics
copying build/lib.linux-x86_64-3.9/Bio/Graphics/Distribution.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics
copying build/lib.linux-x86_64-3.9/Bio/Graphics/Comparative.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram
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copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_Graph.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_Colors.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_Track.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_Diagram.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_CrossLink.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_Feature.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram
copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_GraphSet.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/HMM
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copying build/lib.linux-x86_64-3.9/Bio/HMM/Utilities.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/HMM
copying build/lib.linux-x86_64-3.9/Bio/HMM/Trainer.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/HMM
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copying build/lib.linux-x86_64-3.9/Bio/HMM/MarkovModel.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/HMM
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/Compound
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/Enzyme
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/Gene
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/Map
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/KGML
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copying build/lib.linux-x86_64-3.9/Bio/KEGG/KGML/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/KGML
copying build/lib.linux-x86_64-3.9/Bio/KEGG/KGML/KGML_parser.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/KGML
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/mmtf
copying build/lib.linux-x86_64-3.9/Bio/PDB/mmtf/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/mmtf
copying build/lib.linux-x86_64-3.9/Bio/PDB/mmtf/mmtfio.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/mmtf
copying build/lib.linux-x86_64-3.9/Bio/PDB/mmtf/DefaultParser.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/mmtf
copying build/lib.linux-x86_64-3.9/Bio/PDB/PDBList.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/HSExposure.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/NeighborSearch.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/vectors.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/PDBParser.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/Selection.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/Dice.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/FragmentMapper.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/Polypeptide.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/Structure.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/AbstractPropertyMap.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/ic_data.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/Entity.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/DSSP.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/ResidueDepth.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/PICIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/Model.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/internal_coords.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/Chain.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/parse_pdb_header.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/PDBIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/ic_rebuild.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/StructureBuilder.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/PSEA.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/Residue.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/StructureAlignment.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/MMCIFParser.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/NACCESS.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/MMCIF2Dict.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/Superimposer.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/SCADIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/PDBExceptions.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/Atom.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
copying build/lib.linux-x86_64-3.9/Bio/PDB/mmcifio.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/QCPSuperimposer
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copying build/lib.linux-x86_64-3.9/Bio/PDB/kdtrees.c -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Medline
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs
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copying build/lib.linux-x86_64-3.9/Bio/motifs/alignace.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/jaspar
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copying build/lib.linux-x86_64-3.9/Bio/motifs/jaspar/db.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/jaspar
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copying build/lib.linux-x86_64-3.9/Bio/Nexus/Nexus.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus
copying build/lib.linux-x86_64-3.9/Bio/Nexus/Trees.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus
copying build/lib.linux-x86_64-3.9/Bio/Nexus/Nodes.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus
copying build/lib.linux-x86_64-3.9/Bio/Nexus/cnexus.c -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus
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copying build/lib.linux-x86_64-3.9/Bio/NMR/xpktools.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/NMR
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Pathway/Rep
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copying build/lib.linux-x86_64-3.9/Bio/Pathway/Rep/MultiGraph.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Pathway/Rep
copying build/lib.linux-x86_64-3.9/Bio/Pathway/Rep/Graph.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Pathway/Rep
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/phenotype
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copying build/lib.linux-x86_64-3.9/Bio/phenotype/pm_fitting.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/phenotype
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/GenePop
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copying build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop/LargeFileParser.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/GenePop
copying build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop/EasyController.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/GenePop
copying build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop/FileParser.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/GenePop
copying build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop/Controller.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/GenePop
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Restriction
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copying build/lib.linux-x86_64-3.9/Bio/Restriction/Restriction_Dictionary.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Restriction
copying build/lib.linux-x86_64-3.9/Bio/Restriction/PrintFormat.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Restriction
copying build/lib.linux-x86_64-3.9/Bio/Restriction/Restriction.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Restriction
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP
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copying build/lib.linux-x86_64-3.9/Bio/SCOP/Des.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP
copying build/lib.linux-x86_64-3.9/Bio/SCOP/Raf.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP
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copying build/lib.linux-x86_64-3.9/Bio/SCOP/Cla.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO
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copying build/lib.linux-x86_64-3.9/Bio/SearchIO/_index.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_legacy
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copying build/lib.linux-x86_64-3.9/Bio/SearchIO/_legacy/NCBIStandalone.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_legacy
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_model
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/BlastIO
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copying build/lib.linux-x86_64-3.9/Bio/SearchIO/BlastIO/blast_tab.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/BlastIO
copying build/lib.linux-x86_64-3.9/Bio/SearchIO/BlastIO/blast_xml.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/BlastIO
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HHsuiteIO
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creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/ExonerateIO
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copying build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/ExonerateIO
copying build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/ExonerateIO
copying build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO/_base.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/ExonerateIO
copying build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO/exonerate_text.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/ExonerateIO
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copying build/lib.linux-x86_64-3.9/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/InterproscanIO
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
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copying build/lib.linux-x86_64-3.9/Bio/SeqIO/AbiIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
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copying build/lib.linux-x86_64-3.9/Bio/SeqIO/GckIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
copying build/lib.linux-x86_64-3.9/Bio/SeqIO/SffIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
copying build/lib.linux-x86_64-3.9/Bio/SeqIO/PirIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
copying build/lib.linux-x86_64-3.9/Bio/SeqIO/IgIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
copying build/lib.linux-x86_64-3.9/Bio/SeqIO/UniprotIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
copying build/lib.linux-x86_64-3.9/Bio/SeqIO/TabIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
copying build/lib.linux-x86_64-3.9/Bio/SeqIO/NibIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
copying build/lib.linux-x86_64-3.9/Bio/SeqIO/InsdcIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
copying build/lib.linux-x86_64-3.9/Bio/SeqIO/QualityIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
copying build/lib.linux-x86_64-3.9/Bio/SeqIO/_index.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
copying build/lib.linux-x86_64-3.9/Bio/SeqIO/PdbIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
copying build/lib.linux-x86_64-3.9/Bio/SeqIO/SeqXmlIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
copying build/lib.linux-x86_64-3.9/Bio/SeqIO/AceIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
copying build/lib.linux-x86_64-3.9/Bio/SeqIO/FastaIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
copying build/lib.linux-x86_64-3.9/Bio/SeqIO/PhdIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
copying build/lib.linux-x86_64-3.9/Bio/SeqIO/SnapGeneIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
copying build/lib.linux-x86_64-3.9/Bio/SeqIO/Interfaces.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils
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copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/CheckSum.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils
copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/ProtParamData.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils
copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils
copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/MeltingTemp.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils
copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/ProtParam.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils
copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/CodonUsageIndices.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils
copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/lcc.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils
copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/IsoelectricPoint.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing
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copying build/lib.linux-x86_64-3.9/Bio/Sequencing/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing
copying build/lib.linux-x86_64-3.9/Bio/Sequencing/Phd.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/Applications
copying build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications/_Novoalign.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/Applications
copying build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/Applications
copying build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications/_samtools.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/Applications
copying build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications/_bwa.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/Applications
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Statistics
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copying build/lib.linux-x86_64-3.9/Bio/Statistics/lowess.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Statistics
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SubsMat
copying build/lib.linux-x86_64-3.9/Bio/SubsMat/FreqTable.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SubsMat
copying build/lib.linux-x86_64-3.9/Bio/SubsMat/MatrixInfo.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SubsMat
copying build/lib.linux-x86_64-3.9/Bio/SubsMat/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SubsMat
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SVDSuperimposer
copying build/lib.linux-x86_64-3.9/Bio/SVDSuperimposer/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SVDSuperimposer
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SwissProt
copying build/lib.linux-x86_64-3.9/Bio/SwissProt/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SwissProt
copying build/lib.linux-x86_64-3.9/Bio/SwissProt/KeyWList.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SwissProt
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/TogoWS
copying build/lib.linux-x86_64-3.9/Bio/TogoWS/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/TogoWS
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
copying build/lib.linux-x86_64-3.9/Bio/Phylo/_utils.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
copying build/lib.linux-x86_64-3.9/Bio/Phylo/NexusIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
copying build/lib.linux-x86_64-3.9/Bio/Phylo/Newick.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
copying build/lib.linux-x86_64-3.9/Bio/Phylo/BaseTree.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
copying build/lib.linux-x86_64-3.9/Bio/Phylo/NeXMLIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
copying build/lib.linux-x86_64-3.9/Bio/Phylo/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
copying build/lib.linux-x86_64-3.9/Bio/Phylo/NeXML.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
copying build/lib.linux-x86_64-3.9/Bio/Phylo/PhyloXMLIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
copying build/lib.linux-x86_64-3.9/Bio/Phylo/_io.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
copying build/lib.linux-x86_64-3.9/Bio/Phylo/CDAOIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
copying build/lib.linux-x86_64-3.9/Bio/Phylo/CDAO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
copying build/lib.linux-x86_64-3.9/Bio/Phylo/NewickIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
copying build/lib.linux-x86_64-3.9/Bio/Phylo/_cdao_owl.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
copying build/lib.linux-x86_64-3.9/Bio/Phylo/TreeConstruction.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
copying build/lib.linux-x86_64-3.9/Bio/Phylo/PhyloXML.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
copying build/lib.linux-x86_64-3.9/Bio/Phylo/Consensus.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/Applications
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copying build/lib.linux-x86_64-3.9/Bio/Phylo/Applications/_Fasttree.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/Applications
copying build/lib.linux-x86_64-3.9/Bio/Phylo/Applications/_Phyml.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/Applications
copying build/lib.linux-x86_64-3.9/Bio/Phylo/Applications/_Raxml.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/Applications
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML
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copying build/lib.linux-x86_64-3.9/Bio/Phylo/PAML/_paml.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML
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copying build/lib.linux-x86_64-3.9/Bio/UniProt/GOA.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/UniProt
creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Wise
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copying build/lib.linux-x86_64-3.9/Bio/Wise/psw.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Wise
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copying build/lib.linux-x86_64-3.9/BioSQL/Loader.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/BioSQL
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copying build/lib.linux-x86_64-3.9/BioSQL/BioSeqDatabase.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/BioSQL
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running install_egg_info
Copying biopython.egg-info to /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/biopython-1.78-py3.9.egg-info
running install_scripts

Slackware package maker, version 3.14159265.

Searching for symbolic links:

No symbolic links were found, so we won't make an installation script.
You can make your own later in ./install/doinst.sh and rebuild the
package if you like.

This next step is optional - you can set the directories in your package
to some sane permissions. If any of the directories in your package have
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Creating Slackware package:  /usr/src/slapt-src/academic/biopython/biopython-1.78-x86_64-1salix15.0.txz


Slackware package /usr/src/slapt-src/academic/biopython/biopython-1.78-x86_64-1salix15.0.txz created.

Installing package biopython-1.78-x86_64-1salix15.0...
| biopython (A set of Python tools for biological computation)
| 
| Biopython is a set of freely available tools for biological
| computation written in Python. Biopython features include parsers
| for various Bioinformatics file formats (BLAST, Clustalw, FASTA,
| Genbank), access to online services (NCBI, Expasy), interfaces to
| common and not-so-common programs (Clustalw, DSSP, MSMS), a
| standard sequence class, various clustering modules, a KD tree
| data structure etc. and even documentation.
| 
| https://biopython.org/
| 
|