The following packages will be installed: kraken Fetching README... 0%100%100%100%100%100%Done Fetching References... 0%100%100%100%100%100%Done Fetching kraken.SlackBuild... 0%100%100%100%100%100%Done Fetching kraken.info... 0%100%100%100%100%100%Done Fetching slack-desc... 0%100%100%100%100%100%Done kraken-1.1.1/ kraken-1.1.1/CHANGELOG kraken-1.1.1/LICENSE kraken-1.1.1/README.md kraken-1.1.1/docs/ kraken-1.1.1/docs/MANUAL.html kraken-1.1.1/docs/MANUAL.markdown kraken-1.1.1/docs/Makefile kraken-1.1.1/docs/bar-bg.png kraken-1.1.1/docs/head.html kraken-1.1.1/docs/kraken.css kraken-1.1.1/docs/top.html kraken-1.1.1/install_kraken.sh kraken-1.1.1/scripts/ kraken-1.1.1/scripts/add_to_library.sh kraken-1.1.1/scripts/build_kraken_db.sh kraken-1.1.1/scripts/check_for_jellyfish.sh kraken-1.1.1/scripts/clean_db.sh kraken-1.1.1/scripts/convert_gb_to_fa.pl kraken-1.1.1/scripts/cp_into_tempfile.pl kraken-1.1.1/scripts/download_genomic_library.sh kraken-1.1.1/scripts/download_taxonomy.sh kraken-1.1.1/scripts/kraken kraken-1.1.1/scripts/kraken-build kraken-1.1.1/scripts/kraken-filter kraken-1.1.1/scripts/kraken-mpa-report kraken-1.1.1/scripts/kraken-report kraken-1.1.1/scripts/kraken-translate kraken-1.1.1/scripts/krakenlib.pm kraken-1.1.1/scripts/lookup_accession_numbers.pl kraken-1.1.1/scripts/read_merger.pl kraken-1.1.1/scripts/report_gi_numbers.pl kraken-1.1.1/scripts/rsync_from_ncbi.pl kraken-1.1.1/scripts/scan_fasta_file.pl kraken-1.1.1/scripts/shrink_db.sh kraken-1.1.1/scripts/standard_installation.sh kraken-1.1.1/scripts/upgrade_db.sh kraken-1.1.1/scripts/verify_gi_numbers.pl kraken-1.1.1/src/ kraken-1.1.1/src/Makefile kraken-1.1.1/src/classify.cpp kraken-1.1.1/src/db_shrink.cpp kraken-1.1.1/src/db_sort.cpp kraken-1.1.1/src/kmer_estimator.cpp kraken-1.1.1/src/kraken_headers.hpp kraken-1.1.1/src/krakendb.cpp kraken-1.1.1/src/krakendb.hpp kraken-1.1.1/src/krakenutil.cpp kraken-1.1.1/src/krakenutil.hpp kraken-1.1.1/src/make_seqid_to_taxid_map.cpp kraken-1.1.1/src/quickfile.cpp kraken-1.1.1/src/quickfile.hpp kraken-1.1.1/src/seqreader.cpp kraken-1.1.1/src/seqreader.hpp kraken-1.1.1/src/set_lcas.cpp make: Entering directory '/usr/src/slapt-src/academic/kraken/kraken-1.1.1/src' g++ -O2 -fPIC -c krakendb.cpp g++ -O2 -fPIC -c quickfile.cpp g++ -O2 -fPIC db_sort.cpp krakendb.o quickfile.o -o db_sort g++ -O2 -fPIC -c krakenutil.cpp g++ -O2 -fPIC -c seqreader.cpp g++ -O2 -fPIC set_lcas.cpp krakendb.o quickfile.o krakenutil.o seqreader.o -o set_lcas g++ -O2 -fPIC classify.cpp krakendb.o quickfile.o krakenutil.o seqreader.o -o classify g++ -O2 -fPIC make_seqid_to_taxid_map.cpp quickfile.o -o make_seqid_to_taxid_map g++ -O2 -fPIC db_shrink.cpp krakendb.o quickfile.o -o db_shrink g++ -O2 -fPIC kmer_estimator.cpp krakenutil.o seqreader.o -o kmer_estimator cp db_sort set_lcas classify make_seqid_to_taxid_map db_shrink kmer_estimator /usr/src/slapt-src/academic/kraken/package-kraken/usr/bin/ make: Leaving directory '/usr/src/slapt-src/academic/kraken/kraken-1.1.1/src' Slackware package maker, version 3.14159265. Searching for symbolic links: No symbolic links were found, so we won't make an installation script. You can make your own later in ./install/doinst.sh and rebuild the package if you like. This next step is optional - you can set the directories in your package to some sane permissions. If any of the directories in your package have special permissions, then DO NOT reset them here! Would you like to reset all directory permissions to 755 (drwxr-xr-x) and directory ownerships to root.root ([y]es, [n]o)? n Creating Slackware package: /usr/src/slapt-src/academic/kraken/kraken-1.1.1-x86_64-1salix15.0.txz ./ install/ install/slack-desc usr/ usr/bin/ usr/bin/add_to_library.sh usr/bin/build_kraken_db.sh usr/bin/check_for_jellyfish.sh usr/bin/classify usr/bin/clean_db.sh usr/bin/convert_gb_to_fa.pl usr/bin/cp_into_tempfile.pl usr/bin/db_shrink usr/bin/db_sort usr/bin/download_genomic_library.sh usr/bin/download_taxonomy.sh usr/bin/kmer_estimator usr/bin/kraken usr/bin/kraken-build usr/bin/kraken-filter usr/bin/kraken-mpa-report usr/bin/kraken-report usr/bin/kraken-translate usr/bin/krakenlib.pm usr/bin/lookup_accession_numbers.pl usr/bin/make_seqid_to_taxid_map usr/bin/read_merger.pl usr/bin/report_gi_numbers.pl usr/bin/rsync_from_ncbi.pl usr/bin/scan_fasta_file.pl usr/bin/set_lcas usr/bin/shrink_db.sh usr/bin/standard_installation.sh usr/bin/upgrade_db.sh usr/bin/verify_gi_numbers.pl usr/doc/ usr/doc/kraken-1.1.1/ usr/doc/kraken-1.1.1/CHANGELOG usr/doc/kraken-1.1.1/LICENSE usr/doc/kraken-1.1.1/MANUAL.markdown usr/doc/kraken-1.1.1/README.md usr/doc/kraken-1.1.1/References usr/doc/kraken-1.1.1/kraken.SlackBuild Slackware package /usr/src/slapt-src/academic/kraken/kraken-1.1.1-x86_64-1salix15.0.txz created. Installing package kraken-1.1.1-x86_64-1salix15.0... | kraken (Assign taxonomic labels to short DNA sequences) | | Kraken is a system for assigning taxonomic labels to short DNA | sequences, usually obtained through metagenomic studies. Kraken | aims to achieve high sensitivity and high speed by utilizing exact | alignments of k-mers and a novel classification algorithm. | | Home: http://ccb.jhu.edu/software/kraken/ | | | | |