CMake Deprecation Warning at CMakeLists.txt:3 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at CMakeLists.txt:16 (cmake_policy): The OLD behavior for policy CMP0005 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. CMake Deprecation Warning at CMakeLists.txt:18 (cmake_policy): The OLD behavior for policy CMP0042 will be removed from a future version of CMake. 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function ‘int OpenBabel::OBBitVec::NextBit(int) const’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/bitvec.cpp:69:17: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 69 | {register int m; \ | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/bitvec.cpp:234:13: note: in expansion of macro ‘LowBit’ 234 | LowBit(s,bit); | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/bitvec.cpp:69:17: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 69 | {register int m; \ | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/bitvec.cpp:246:13: note: in expansion of macro ‘LowBit’ 246 | LowBit(s, bit); | ^~~~~~ [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bond.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/bond.o -MF CMakeFiles/openbabel.dir/bond.o.d -o CMakeFiles/openbabel.dir/bond.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/bond.cpp [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bondtyper.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/bondtyper.o -MF CMakeFiles/openbabel.dir/bondtyper.o.d -o CMakeFiles/openbabel.dir/bondtyper.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/bondtyper.cpp [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/builder.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/builder.o -MF CMakeFiles/openbabel.dir/builder.o.d -o CMakeFiles/openbabel.dir/builder.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/builder.cpp [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/canon.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/canon.o -MF CMakeFiles/openbabel.dir/canon.o.d -o CMakeFiles/openbabel.dir/canon.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/canon.cpp [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/chains.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/chains.o -MF CMakeFiles/openbabel.dir/chains.o.d -o CMakeFiles/openbabel.dir/chains.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/chains.cpp [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/chargemodel.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/chargemodel.o -MF CMakeFiles/openbabel.dir/chargemodel.o.d -o CMakeFiles/openbabel.dir/chargemodel.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/chargemodel.cpp [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/chiral.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/chiral.o -MF CMakeFiles/openbabel.dir/chiral.o.d -o CMakeFiles/openbabel.dir/chiral.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/chiral.cpp [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/data.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/data.o -MF CMakeFiles/openbabel.dir/data.o.d -o CMakeFiles/openbabel.dir/data.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/data.cpp [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/data_utilities.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/data_utilities.o -MF CMakeFiles/openbabel.dir/data_utilities.o.d -o CMakeFiles/openbabel.dir/data_utilities.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/data_utilities.cpp [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/descriptor.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/descriptor.o -MF CMakeFiles/openbabel.dir/descriptor.o.d -o CMakeFiles/openbabel.dir/descriptor.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/descriptor.cpp [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/fingerprint.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/fingerprint.o -MF CMakeFiles/openbabel.dir/fingerprint.o.d -o CMakeFiles/openbabel.dir/fingerprint.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp: In member function ‘bool OpenBabel::FastSearch::Find(OpenBabel::OBBase*, std::vector&, unsigned int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:149:28: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 149 | register unsigned int* p; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:150:28: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 150 | register unsigned int* ppat; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:151:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 151 | register unsigned int a; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp: In member function ‘bool OpenBabel::FastSearch::FindMatch(OpenBabel::OBBase*, std::vector&, unsigned int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:200:26: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 200 | register unsigned int* p; // current position in index | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:201:26: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 201 | register unsigned int* ppat; // current position in target FP | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp: In member function ‘bool OpenBabel::FastSearch::FindSimilar(OpenBabel::OBBase*, std::multimap&, double, double)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:237:28: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 237 | register unsigned int* p; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:238:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 238 | register unsigned int i; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp: In member function ‘bool OpenBabel::FastSearch::FindSimilar(OpenBabel::OBBase*, std::multimap&, int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:272:28: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 272 | register unsigned int* p; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprint.cpp:273:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 273 | register unsigned int i; | ^ [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/forcefield.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/forcefield.o -MF CMakeFiles/openbabel.dir/forcefield.o.d -o CMakeFiles/openbabel.dir/forcefield.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/forcefield.cpp [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/format.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/format.o -MF CMakeFiles/openbabel.dir/format.o.d -o CMakeFiles/openbabel.dir/format.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/format.cpp [ 4%] Building CXX object src/CMakeFiles/openbabel.dir/generic.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/kekulize.o -MF CMakeFiles/openbabel.dir/kekulize.o.d -o CMakeFiles/openbabel.dir/kekulize.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/kekulize.cpp [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/locale.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/mol.o -MF CMakeFiles/openbabel.dir/mol.o.d -o CMakeFiles/openbabel.dir/mol.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/mol.cpp [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/obconversion.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/obconversion.o -MF CMakeFiles/openbabel.dir/obconversion.o.d -o CMakeFiles/openbabel.dir/obconversion.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obconversion.cpp [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/oberror.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/oberror.o -MF CMakeFiles/openbabel.dir/oberror.o.d -o CMakeFiles/openbabel.dir/oberror.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/oberror.cpp [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/obiter.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/obiter.o -MF CMakeFiles/openbabel.dir/obiter.o.d -o CMakeFiles/openbabel.dir/obiter.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obiter.cpp [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/obutil.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/obutil.o -MF CMakeFiles/openbabel.dir/obutil.o.d -o CMakeFiles/openbabel.dir/obutil.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp: In function ‘void OpenBabel::qtrfit(double*, double*, int, double (*)[3])’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:683:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 683 | register int i; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp: In function ‘int OpenBabel::SolveQuadratic(double, double, double)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:796:21: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 796 | register double Descr, Temp, TwoA; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:796:28: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 796 | register double Descr, Temp, TwoA; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:796:34: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 796 | register double Descr, Temp, TwoA; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp: In function ‘int OpenBabel::SolveCubic(double, double, double, double)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:841:21: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 841 | register double TwoA, ThreeA, BOver3A; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:841:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 841 | register double TwoA, ThreeA, BOver3A; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:841:35: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 841 | register double TwoA, ThreeA, BOver3A; | ^~~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:842:21: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 842 | register double Temp, POver3, QOver2; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:842:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 842 | register double Temp, POver3, QOver2; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:842:35: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 842 | register double Temp, POver3, QOver2; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:843:21: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 843 | register double Desc, Rho, Psi; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:843:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 843 | register double Desc, Rho, Psi; | ^~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obutil.cpp:843:32: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 843 | register double Desc, Rho, Psi; | ^~~ [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/op.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/op.o -MF CMakeFiles/openbabel.dir/op.o.d -o CMakeFiles/openbabel.dir/op.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/op.cpp [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/parsmart.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/parsmart.o -MF CMakeFiles/openbabel.dir/parsmart.o.d -o CMakeFiles/openbabel.dir/parsmart.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::AtomExpr* OpenBabel::CopyAtomExpr(OpenBabel::AtomExpr*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:177:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 177 | register AtomExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::AtomExpr* OpenBabel::BuildAtomPred(int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:233:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 233 | register AtomExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::AtomExpr* OpenBabel::BuildAtomLeaf(int, int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:243:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 243 | register AtomExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::AtomExpr* OpenBabel::BuildAtomNot(OpenBabel::AtomExpr*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:253:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 253 | register AtomExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::AtomExpr* OpenBabel::BuildAtomBin(int, OpenBabel::AtomExpr*, OpenBabel::AtomExpr*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:263:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 263 | register AtomExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::AtomExpr* OpenBabel::BuildAtomRecurs(OpenBabel::Pattern*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:274:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 274 | register AtomExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::BondExpr* OpenBabel::CopyBondExpr(OpenBabel::BondExpr*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:304:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 304 | register BondExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::BondExpr* OpenBabel::BuildBondLeaf(int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:387:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 387 | register BondExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::BondExpr* OpenBabel::BuildBondNot(OpenBabel::BondExpr*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:396:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 396 | register BondExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::BondExpr* OpenBabel::BuildBondBin(int, OpenBabel::BondExpr*, OpenBabel::BondExpr*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:406:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 406 | register BondExpr *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In member function ‘OpenBabel::AtomExpr* OpenBabel::OBSmartsPattern::ParseComplexAtomPrimitive()’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:646:23: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 646 | register Pattern *pat; | ^~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:647:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 647 | register int index; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In member function ‘OpenBabel::AtomExpr* OpenBabel::OBSmartsPattern::ParseAtomExpr(int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1166:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1166 | register AtomExpr *expr1 = NULL; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1167:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1167 | register AtomExpr *expr2 = NULL; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1168:20: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1168 | register char *prev; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In member function ‘OpenBabel::BondExpr* OpenBabel::OBSmartsPattern::ParseBondExpr(int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1266:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1266 | register BondExpr *expr1 = NULL; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1267:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1267 | register BondExpr *expr2 = NULL; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1268:20: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1268 | register char *prev; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In member function ‘OpenBabel::Pattern* OpenBabel::OBSmartsPattern::SMARTSParser(OpenBabel::Pattern*, OpenBabel::ParseState*, int, int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1367:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1367 | register AtomExpr *aexpr; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1368:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1368 | register BondExpr *bexpr; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1369:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1369 | register int index; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In member function ‘OpenBabel::Pattern* OpenBabel::OBSmartsPattern::ParseSMARTSString(char*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1682:23: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1682 | register Pattern *result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In member function ‘OpenBabel::Pattern* OpenBabel::OBSmartsPattern::ParseSMARTSRecord(char*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1696:20: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1696 | register char *src; | ^~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp: In function ‘OpenBabel::AtomExpr* OpenBabel::NotAtomExpr(OpenBabel::AtomExpr*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/parsmart.cpp:1718:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 1718 | register AtomExpr *result; | ^~~~~~ [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/patty.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/patty.o -MF CMakeFiles/openbabel.dir/patty.o.d -o CMakeFiles/openbabel.dir/patty.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/patty.cpp [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/phmodel.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/phmodel.o -MF CMakeFiles/openbabel.dir/phmodel.o.d -o CMakeFiles/openbabel.dir/phmodel.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/phmodel.cpp [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/plugin.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/plugin.o -MF CMakeFiles/openbabel.dir/plugin.o.d -o CMakeFiles/openbabel.dir/plugin.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/plugin.cpp [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/pointgroup.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/pointgroup.o -MF CMakeFiles/openbabel.dir/pointgroup.o.d -o CMakeFiles/openbabel.dir/pointgroup.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/pointgroup.cpp [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/query.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/query.o -MF CMakeFiles/openbabel.dir/query.o.d -o CMakeFiles/openbabel.dir/query.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/query.cpp [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/rand.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/rand.o -MF CMakeFiles/openbabel.dir/rand.o.d -o CMakeFiles/openbabel.dir/rand.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘unsigned int OpenBabel::isqrt(unsigned int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:96:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 96 | register unsigned int temp; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:97:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 97 | register unsigned int rem; | ^~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:98:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 98 | register int i,result; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:98:20: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 98 | register int i,result; | ^~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘int OpenBabel::IsOddPrime(unsigned int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:136:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 136 | register unsigned int root; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:137:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 137 | register unsigned int i; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘void OpenBabel::DoubleMultiply(unsigned int, unsigned int, OpenBabel::DoubleType*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:204:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 204 | register unsigned int x0, x1, x2, x3; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:204:31: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 204 | register unsigned int x0, x1, x2, x3; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:204:35: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 204 | register unsigned int x0, x1, x2, x3; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:204:39: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 204 | register unsigned int x0, x1, x2, x3; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:205:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 205 | register unsigned int hx, lx; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:205:31: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 205 | register unsigned int hx, lx; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:206:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 206 | register unsigned int hy, ly; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:206:31: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 206 | register unsigned int hy, ly; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘unsigned int OpenBabel::DoubleModulus(OpenBabel::DoubleType*, unsigned int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:259:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 259 | register unsigned int d1, d0; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:259:31: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 259 | register unsigned int d1, d0; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:260:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 260 | register unsigned int r1, r0; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:260:31: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 260 | register unsigned int r1, r0; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:261:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 261 | register unsigned int m,s; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:261:29: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 261 | register unsigned int m,s; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘int OpenBabel::DeterminePotency(unsigned int, unsigned int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:300:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 300 | register unsigned int k; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:301:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 301 | register unsigned int b; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:302:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 302 | register int s; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘int OpenBabel::DetermineFactors(unsigned int, unsigned int*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:318:28: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 318 | register unsigned int *ptr; | ^~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:319:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 319 | register unsigned int half; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:320:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 320 | register unsigned int i; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘unsigned int OpenBabel::DetermineIncrement(unsigned int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:340:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 340 | register unsigned int hi,lo; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:340:30: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 340 | register unsigned int hi,lo; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:341:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 341 | register unsigned int half; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:342:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 342 | register unsigned int i; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘int OpenBabel::DetermineSequence(unsigned int, unsigned int*, unsigned int*, unsigned int*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:374:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 374 | register unsigned int a=0, c; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:374:32: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 374 | register unsigned int a=0, c; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:375:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 375 | register unsigned int b; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:376:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 376 | register int pot,best; | ^~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:376:22: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 376 | register int pot,best; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:377:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 377 | register int count; | ^~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:378:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 378 | register int flag; | ^~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:379:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 379 | register int i; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp: In function ‘void OpenBabel::GenerateSequence(unsigned int, unsigned int, unsigned int, unsigned int)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:431:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 431 | register unsigned int i; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rand.cpp:432:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 432 | register unsigned int x; | ^ [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/residue.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/residue.o -MF CMakeFiles/openbabel.dir/residue.o.d -o CMakeFiles/openbabel.dir/residue.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/residue.cpp [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/ring.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/ring.o -MF CMakeFiles/openbabel.dir/ring.o.d -o CMakeFiles/openbabel.dir/ring.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ring.cpp [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/rotamer.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/rotamer.o -MF CMakeFiles/openbabel.dir/rotamer.o.d -o CMakeFiles/openbabel.dir/rotamer.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rotamer.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/rotor.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/rotor.o -MF CMakeFiles/openbabel.dir/rotor.o.d -o CMakeFiles/openbabel.dir/rotor.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/rotor.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/spectrophore.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/spectrophore.o -MF CMakeFiles/openbabel.dir/spectrophore.o.d -o CMakeFiles/openbabel.dir/spectrophore.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/spectrophore.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/tautomer.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/tautomer.o -MF CMakeFiles/openbabel.dir/tautomer.o.d -o CMakeFiles/openbabel.dir/tautomer.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/tautomer.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/tokenst.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/tokenst.o -MF CMakeFiles/openbabel.dir/tokenst.o.d -o CMakeFiles/openbabel.dir/tokenst.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/tokenst.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/transform.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/transform.o -MF CMakeFiles/openbabel.dir/transform.o.d -o CMakeFiles/openbabel.dir/transform.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/transform.cpp [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/typer.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/typer.o -MF CMakeFiles/openbabel.dir/typer.o.d -o CMakeFiles/openbabel.dir/typer.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/typer.cpp [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/obmolecformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/obmolecformat.o -MF CMakeFiles/openbabel.dir/obmolecformat.o.d -o CMakeFiles/openbabel.dir/obmolecformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/obmolecformat.cpp [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/conformersearch.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 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-fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/depict/svgpainter.o -MF CMakeFiles/openbabel.dir/depict/svgpainter.o.d -o CMakeFiles/openbabel.dir/depict/svgpainter.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/depict/svgpainter.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/math/matrix3x3.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/math/matrix3x3.o -MF CMakeFiles/openbabel.dir/math/matrix3x3.o.d -o CMakeFiles/openbabel.dir/math/matrix3x3.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/matrix3x3.cpp /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/matrix3x3.cpp: In static member function ‘static void OpenBabel::matrix3x3::jacobi(unsigned int, double*, double*, double*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/matrix3x3.cpp:566:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 566 | register int i, j, k, l; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/matrix3x3.cpp:566:21: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 566 | register int i, j, k, l; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/matrix3x3.cpp:566:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 566 | register int i, j, k, l; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/matrix3x3.cpp:566:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 566 | register int i, j, k, l; | ^ [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/math/spacegroup.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/math/spacegroup.o -MF CMakeFiles/openbabel.dir/math/spacegroup.o.d -o CMakeFiles/openbabel.dir/math/spacegroup.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/spacegroup.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/math/transform3d.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/math/transform3d.o -MF CMakeFiles/openbabel.dir/math/transform3d.o.d -o CMakeFiles/openbabel.dir/math/transform3d.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/transform3d.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/math/vector3.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/math/vector3.o -MF CMakeFiles/openbabel.dir/math/vector3.o.d -o CMakeFiles/openbabel.dir/math/vector3.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/vector3.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/math/align.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/math/align.o -MF CMakeFiles/openbabel.dir/math/align.o.d -o CMakeFiles/openbabel.dir/math/align.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/math/align.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/stereo.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/stereo/stereo.o -MF CMakeFiles/openbabel.dir/stereo/stereo.o.d -o CMakeFiles/openbabel.dir/stereo/stereo.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/stereo.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetranonplanar.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/stereo/tetranonplanar.o -MF CMakeFiles/openbabel.dir/stereo/tetranonplanar.o.d -o CMakeFiles/openbabel.dir/stereo/tetranonplanar.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/tetranonplanar.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetraplanar.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/stereo/tetraplanar.o -MF CMakeFiles/openbabel.dir/stereo/tetraplanar.o.d -o CMakeFiles/openbabel.dir/stereo/tetraplanar.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/tetraplanar.cpp [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/squareplanar.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/stereo/squareplanar.o -MF CMakeFiles/openbabel.dir/stereo/squareplanar.o.d -o CMakeFiles/openbabel.dir/stereo/squareplanar.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/squareplanar.cpp [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/cistrans.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/stereo/cistrans.o -MF CMakeFiles/openbabel.dir/stereo/cistrans.o.d -o CMakeFiles/openbabel.dir/stereo/cistrans.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/cistrans.cpp [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetrahedral.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/stereo/tetrahedral.o -MF CMakeFiles/openbabel.dir/stereo/tetrahedral.o.d -o CMakeFiles/openbabel.dir/stereo/tetrahedral.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/tetrahedral.cpp [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/perception.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/stereo/perception.o -MF CMakeFiles/openbabel.dir/stereo/perception.o.d -o CMakeFiles/openbabel.dir/stereo/perception.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/perception.cpp /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/perception.cpp: In function ‘void OpenBabel::StereoRefToImplicit(OpenBabel::OBMol&, OpenBabel::OBStereo::Ref)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/perception.cpp:2871:16: warning: ‘template class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 2871 | const std::binder1st > equal_to_atomId = std::bind1st (equal_to(), atomId); | ^~~~~~~~~ In file included from /usr/include/c++/11.2.0/bits/stl_function.h:1407, from /usr/include/c++/11.2.0/bits/stl_tree.h:65, from /usr/include/c++/11.2.0/map:60, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/openbabel/base.h:26, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/openbabel/stereo/stereo.h:27, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/openbabel/stereo/tetranonplanar.h:27, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/openbabel/stereo/tetrahedral.h:27, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/perception.cpp:25: /usr/include/c++/11.2.0/backward/binders.h:108:11: note: declared here 108 | class binder1st | ^~~~~~~~~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/perception.cpp: In function ‘void OpenBabel::ImplicitRefToStereo(OpenBabel::OBMol&, OpenBabel::OBStereo::Ref, OpenBabel::OBStereo::Ref)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/perception.cpp:2903:16: warning: ‘template class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 2903 | const std::binder1st > equal_to_implicitRef = std::bind1st (equal_to(), (OBStereo::Ref) OBStereo::ImplicitRef); | ^~~~~~~~~ In file included from /usr/include/c++/11.2.0/bits/stl_function.h:1407, from /usr/include/c++/11.2.0/bits/stl_tree.h:65, from /usr/include/c++/11.2.0/map:60, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/openbabel/base.h:26, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/openbabel/stereo/stereo.h:27, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/openbabel/stereo/tetranonplanar.h:27, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/openbabel/stereo/tetrahedral.h:27, from /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/perception.cpp:25: /usr/include/c++/11.2.0/backward/binders.h:108:11: note: declared here 108 | class binder1st | ^~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/facade.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/openbabel.dir/stereo/facade.o -MF CMakeFiles/openbabel.dir/stereo/facade.o.d -o CMakeFiles/openbabel.dir/stereo/facade.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/stereo/facade.cpp [ 14%] Linking CXX shared library ../lib64/libopenbabel.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/openbabel.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -Wl,-soname,libopenbabel.so.5 -o ../lib64/libopenbabel.so.5.0.0 CMakeFiles/openbabel.dir/alias.o CMakeFiles/openbabel.dir/atom.o CMakeFiles/openbabel.dir/base.o CMakeFiles/openbabel.dir/bitvec.o CMakeFiles/openbabel.dir/bond.o CMakeFiles/openbabel.dir/bondtyper.o CMakeFiles/openbabel.dir/builder.o CMakeFiles/openbabel.dir/canon.o CMakeFiles/openbabel.dir/chains.o CMakeFiles/openbabel.dir/chargemodel.o CMakeFiles/openbabel.dir/chiral.o CMakeFiles/openbabel.dir/data.o CMakeFiles/openbabel.dir/data_utilities.o CMakeFiles/openbabel.dir/descriptor.o CMakeFiles/openbabel.dir/fingerprint.o CMakeFiles/openbabel.dir/forcefield.o CMakeFiles/openbabel.dir/format.o CMakeFiles/openbabel.dir/generic.o CMakeFiles/openbabel.dir/graphsym.o CMakeFiles/openbabel.dir/grid.o CMakeFiles/openbabel.dir/griddata.o 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CMakeFiles/openbabel.dir/obmolecformat.o CMakeFiles/openbabel.dir/conformersearch.o CMakeFiles/openbabel.dir/confsearch.o CMakeFiles/openbabel.dir/distgeom.o CMakeFiles/openbabel.dir/dlhandler_unix.o CMakeFiles/openbabel.dir/depict/depict.o CMakeFiles/openbabel.dir/depict/svgpainter.o CMakeFiles/openbabel.dir/math/matrix3x3.o CMakeFiles/openbabel.dir/math/spacegroup.o CMakeFiles/openbabel.dir/math/transform3d.o CMakeFiles/openbabel.dir/math/vector3.o CMakeFiles/openbabel.dir/math/align.o CMakeFiles/openbabel.dir/stereo/stereo.o CMakeFiles/openbabel.dir/stereo/tetranonplanar.o CMakeFiles/openbabel.dir/stereo/tetraplanar.o CMakeFiles/openbabel.dir/stereo/squareplanar.o CMakeFiles/openbabel.dir/stereo/cistrans.o CMakeFiles/openbabel.dir/stereo/tetrahedral.o CMakeFiles/openbabel.dir/stereo/perception.o CMakeFiles/openbabel.dir/stereo/facade.o -Wl,-rpath,:::::::::: -lm -ldl -lz cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/cmake -E cmake_symlink_library ../lib64/libopenbabel.so.5.0.0 ../lib64/libopenbabel.so.5 ../lib64/libopenbabel.so make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 14%] Built target openbabel make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/CMakeFiles/plugin_charges.dir/DependInfo.cmake --color= make[2]: Leaving directory 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_charges.dir/charges/fromfile.o -MF CMakeFiles/plugin_charges.dir/charges/fromfile.o.d -o CMakeFiles/plugin_charges.dir/charges/fromfile.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/charges/fromfile.cpp [ 16%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eqeq.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_charges.dir/charges/eqeq.o -MF CMakeFiles/plugin_charges.dir/charges/eqeq.o.d -o CMakeFiles/plugin_charges.dir/charges/eqeq.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/charges/eqeq.cpp [ 16%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qeq.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_charges.dir/charges/qeq.o -MF CMakeFiles/plugin_charges.dir/charges/qeq.o.d -o CMakeFiles/plugin_charges.dir/charges/qeq.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/charges/qeq.cpp [ 16%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qtpie.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_charges.dir/charges/qtpie.o -MF CMakeFiles/plugin_charges.dir/charges/qtpie.o.d -o CMakeFiles/plugin_charges.dir/charges/qtpie.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/charges/qtpie.cpp [ 16%] Linking CXX shared module ../lib64/plugin_charges.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_charges.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../lib64/plugin_charges.so CMakeFiles/plugin_charges.dir/charges/eem.o CMakeFiles/plugin_charges.dir/charges/gasteiger.o CMakeFiles/plugin_charges.dir/charges/none.o CMakeFiles/plugin_charges.dir/charges/mmff94.o CMakeFiles/plugin_charges.dir/charges/fromfile.o CMakeFiles/plugin_charges.dir/charges/eqeq.o CMakeFiles/plugin_charges.dir/charges/qeq.o CMakeFiles/plugin_charges.dir/charges/qtpie.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: -lm -ldl -lz ../lib64/libopenbabel.so.5.0.0 -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 16%] Built target plugin_charges make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 16%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addfilename.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/addfilename.o -MF CMakeFiles/plugin_ops.dir/ops/addfilename.o.d -o CMakeFiles/plugin_ops.dir/ops/addfilename.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/addfilename.cpp [ 17%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addinindex.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/addinindex.o -MF CMakeFiles/plugin_ops.dir/ops/addinindex.o.d -o CMakeFiles/plugin_ops.dir/ops/addinindex.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/addinindex.cpp [ 17%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addpolarh.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/addpolarh.o -MF CMakeFiles/plugin_ops.dir/ops/addpolarh.o.d -o CMakeFiles/plugin_ops.dir/ops/addpolarh.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/addpolarh.cpp [ 17%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.o -MF CMakeFiles/plugin_ops.dir/ops/addnonpolarh.o.d -o 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src/CMakeFiles/plugin_ops.dir/ops/changecell.o -MF CMakeFiles/plugin_ops.dir/ops/changecell.o.d -o CMakeFiles/plugin_ops.dir/ops/changecell.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/changecell.cpp [ 18%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delpolarh.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/delpolarh.o -MF CMakeFiles/plugin_ops.dir/ops/delpolarh.o.d -o CMakeFiles/plugin_ops.dir/ops/delpolarh.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/delpolarh.cpp [ 18%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delnonpolarh.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/delnonpolarh.o -MF CMakeFiles/plugin_ops.dir/ops/delnonpolarh.o.d -o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/delnonpolarh.cpp [ 18%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen2D.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/gen2D.o -MF CMakeFiles/plugin_ops.dir/ops/gen2D.o.d -o CMakeFiles/plugin_ops.dir/ops/gen2D.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/gen2D.cpp [ 18%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/fillUC.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/fillUC.o -MF CMakeFiles/plugin_ops.dir/ops/fillUC.o.d -o CMakeFiles/plugin_ops.dir/ops/fillUC.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/fillUC.cpp [ 18%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/forcefield.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/forcefield.o -MF CMakeFiles/plugin_ops.dir/ops/forcefield.o.d -o CMakeFiles/plugin_ops.dir/ops/forcefield.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/forcefield.cpp [ 19%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen3d.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/gen3d.o -MF CMakeFiles/plugin_ops.dir/ops/gen3d.o.d -o CMakeFiles/plugin_ops.dir/ops/gen3d.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/gen3d.cpp [ 19%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/largest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/largest.o -MF CMakeFiles/plugin_ops.dir/ops/largest.o.d -o CMakeFiles/plugin_ops.dir/ops/largest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/largest.cpp [ 19%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/loader.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/loader.o -MF CMakeFiles/plugin_ops.dir/ops/loader.o.d -o CMakeFiles/plugin_ops.dir/ops/loader.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/loader.cpp [ 19%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opsplit.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/opsplit.o -MF CMakeFiles/plugin_ops.dir/ops/opsplit.o.d -o CMakeFiles/plugin_ops.dir/ops/opsplit.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/opsplit.cpp [ 19%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/optransform.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/optransform.o -MF CMakeFiles/plugin_ops.dir/ops/optransform.o.d -o CMakeFiles/plugin_ops.dir/ops/optransform.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/optransform.cpp [ 20%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/partialcharges.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/partialcharges.o -MF CMakeFiles/plugin_ops.dir/ops/partialcharges.o.d -o CMakeFiles/plugin_ops.dir/ops/partialcharges.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/partialcharges.cpp [ 20%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/readconformers.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/readconformers.o -MF CMakeFiles/plugin_ops.dir/ops/readconformers.o.d -o CMakeFiles/plugin_ops.dir/ops/readconformers.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/readconformers.cpp [ 20%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/sort.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS 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-DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/opisomorph.o -MF CMakeFiles/plugin_ops.dir/ops/opisomorph.o.d -o CMakeFiles/plugin_ops.dir/ops/opisomorph.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/opisomorph.cpp [ 20%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/ophighlight.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/ophighlight.o -MF CMakeFiles/plugin_ops.dir/ops/ophighlight.o.d -o CMakeFiles/plugin_ops.dir/ops/ophighlight.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/ophighlight.cpp [ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/xout.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/xout.o -MF CMakeFiles/plugin_ops.dir/ops/xout.o.d -o CMakeFiles/plugin_ops.dir/ops/xout.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/xout.cpp [ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/conformer.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/conformer.o -MF CMakeFiles/plugin_ops.dir/ops/conformer.o.d -o CMakeFiles/plugin_ops.dir/ops/conformer.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/conformer.cpp [ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opalign.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/opalign.o -MF CMakeFiles/plugin_ops.dir/ops/opalign.o.d -o CMakeFiles/plugin_ops.dir/ops/opalign.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/opalign.cpp [ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opconfab.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_ops.dir/ops/opconfab.o -MF CMakeFiles/plugin_ops.dir/ops/opconfab.o.d -o CMakeFiles/plugin_ops.dir/ops/opconfab.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/ops/opconfab.cpp [ 21%] Linking CXX shared module ../lib64/plugin_ops.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_ops.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../lib64/plugin_ops.so CMakeFiles/plugin_ops.dir/ops/addfilename.o CMakeFiles/plugin_ops.dir/ops/addinindex.o CMakeFiles/plugin_ops.dir/ops/addpolarh.o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.o CMakeFiles/plugin_ops.dir/ops/canonical.o CMakeFiles/plugin_ops.dir/ops/changecell.o CMakeFiles/plugin_ops.dir/ops/delpolarh.o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.o CMakeFiles/plugin_ops.dir/ops/gen2D.o CMakeFiles/plugin_ops.dir/ops/fillUC.o CMakeFiles/plugin_ops.dir/ops/forcefield.o CMakeFiles/plugin_ops.dir/ops/gen3d.o CMakeFiles/plugin_ops.dir/ops/largest.o CMakeFiles/plugin_ops.dir/ops/loader.o CMakeFiles/plugin_ops.dir/ops/opsplit.o CMakeFiles/plugin_ops.dir/ops/optransform.o CMakeFiles/plugin_ops.dir/ops/partialcharges.o CMakeFiles/plugin_ops.dir/ops/readconformers.o CMakeFiles/plugin_ops.dir/ops/sort.o CMakeFiles/plugin_ops.dir/ops/opisomorph.o CMakeFiles/plugin_ops.dir/ops/ophighlight.o CMakeFiles/plugin_ops.dir/ops/xout.o CMakeFiles/plugin_ops.dir/ops/conformer.o CMakeFiles/plugin_ops.dir/ops/opalign.o CMakeFiles/plugin_ops.dir/ops/opconfab.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: -lm -ldl -lz ../lib64/libopenbabel.so.5.0.0 -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 21%] Built target plugin_ops make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/CMakeFiles/plugin_forcefields.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 22%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.o cd 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-I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o -MF CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o.d -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/forcefields/forcefielduff.cpp [ 22%] Linking CXX shared module ../lib64/plugin_forcefields.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_forcefields.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../lib64/plugin_forcefields.so 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-Dplugin_fingerprints_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o -MF CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o.d -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/fingerprints/finger2.cpp [ 22%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ 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/usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/descriptors/groupcontrib.cpp [ 23%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/filters.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/filters.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/filters.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/filters.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/descriptors/filters.cpp [ 23%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o -MF CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o.d -o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/descriptors/inchidescriptor.cpp [ 23%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src && /usr/bin/c++ -DHAVE_EIGEN 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichi_bns.o -MF CMakeFiles/inchi.dir/ichi_bns.o.d -o CMakeFiles/inchi.dir/ichi_bns.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichi_bns.c [ 24%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichi_io.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data 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-isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichilnct.o -MF CMakeFiles/inchi.dir/ichilnct.o.d -o CMakeFiles/inchi.dir/ichilnct.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichilnct.c [ 25%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimak2.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichimak2.o -MF CMakeFiles/inchi.dir/ichimak2.o.d -o CMakeFiles/inchi.dir/ichimak2.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichimak2.c [ 26%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimake.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichimake.o -MF CMakeFiles/inchi.dir/ichimake.o.d -o CMakeFiles/inchi.dir/ichimake.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichimake.c [ 26%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap1.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichimap1.o -MF CMakeFiles/inchi.dir/ichimap1.o.d -o CMakeFiles/inchi.dir/ichimap1.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichimap1.c [ 26%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap2.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ 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-isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichiparm.o -MF CMakeFiles/inchi.dir/ichiparm.o.d -o CMakeFiles/inchi.dir/ichiparm.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichiparm.c [ 27%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiprt1.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichiprt1.o -MF CMakeFiles/inchi.dir/ichiprt1.o.d -o CMakeFiles/inchi.dir/ichiprt1.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichiprt1.c [ 27%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiprt2.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichiprt2.o -MF CMakeFiles/inchi.dir/ichiprt2.o.d -o CMakeFiles/inchi.dir/ichiprt2.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichiprt2.c [ 27%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiprt3.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichiprt3.o -MF CMakeFiles/inchi.dir/ichiprt3.o.d -o CMakeFiles/inchi.dir/ichiprt3.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichiprt3.c [ 27%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiqueu.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ 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-isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr1.o -MF CMakeFiles/inchi.dir/ichirvr1.o.d -o CMakeFiles/inchi.dir/ichirvr1.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichirvr1.c [ 28%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr2.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr2.o -MF CMakeFiles/inchi.dir/ichirvr2.o.d -o CMakeFiles/inchi.dir/ichirvr2.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichirvr2.c [ 28%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr3.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr3.o -MF CMakeFiles/inchi.dir/ichirvr3.o.d -o CMakeFiles/inchi.dir/ichirvr3.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichirvr3.c [ 28%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr4.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr4.o -MF CMakeFiles/inchi.dir/ichirvr4.o.d -o CMakeFiles/inchi.dir/ichirvr4.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichirvr4.c [ 29%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr5.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr5.o -MF CMakeFiles/inchi.dir/ichirvr5.o.d -o CMakeFiles/inchi.dir/ichirvr5.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichirvr5.c [ 29%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr6.o cd 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ichister.o -MF CMakeFiles/inchi.dir/ichister.o.d -o CMakeFiles/inchi.dir/ichister.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ichister.c [ 30%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichitaut.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/ikey_base26.o -MF CMakeFiles/inchi.dir/ikey_base26.o.d -o CMakeFiles/inchi.dir/ikey_base26.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/ikey_base26.c [ 30%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ikey_dll.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 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/usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll_a2.o -MF CMakeFiles/inchi.dir/inchi_dll_a2.o.d -o CMakeFiles/inchi.dir/inchi_dll_a2.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/inchi_dll_a2.c [ 31%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll_main.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll_main.o -MF CMakeFiles/inchi.dir/inchi_dll_main.o.d -o CMakeFiles/inchi.dir/inchi_dll_main.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/inchi_dll_main.c [ 31%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/runichi.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/runichi.o -MF CMakeFiles/inchi.dir/runichi.o.d -o CMakeFiles/inchi.dir/runichi.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/runichi.c [ 31%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/sha2.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -O3 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/libinchi/CMakeFiles/inchi.dir/sha2.o -MF CMakeFiles/inchi.dir/sha2.o.d -o CMakeFiles/inchi.dir/sha2.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/sha2.c [ 31%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/strutil.o cd 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src/formats/libinchi/CMakeFiles/inchi.dir/util.o -MF CMakeFiles/inchi.dir/util.o.d -o CMakeFiles/inchi.dir/util.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/libinchi/util.c [ 32%] Linking C shared library ../../../lib64/libinchi.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/libinchi && /usr/bin/cmake -E cmake_link_script CMakeFiles/inchi.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -O2 -fPIC -O3 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -Wl,-soname,libinchi.so.0 -o ../../../lib64/libinchi.so.0.4.1 CMakeFiles/inchi.dir/ichi_bns.o CMakeFiles/inchi.dir/ichi_io.o CMakeFiles/inchi.dir/ichican2.o CMakeFiles/inchi.dir/ichicano.o CMakeFiles/inchi.dir/ichicans.o CMakeFiles/inchi.dir/ichiisot.o CMakeFiles/inchi.dir/ichilnct.o CMakeFiles/inchi.dir/ichimak2.o CMakeFiles/inchi.dir/ichimake.o CMakeFiles/inchi.dir/ichimap1.o CMakeFiles/inchi.dir/ichimap2.o 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.o -MF CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.o.d -o CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/json/pubchemjsonformat.cpp [ 33%] Building CXX object src/formats/CMakeFiles/pubchemjsonformat.dir/json/jsoncpp.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o -MF CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o.d -o CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/xml/cmlreactformat.cpp [ 34%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/xml.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS 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'/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/cmlformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 34%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/cmlformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcmlformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/cmlformat.dir/xml/cmlformat.o -MF 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/usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/cmlformat.dir/xml/xml.o -MF CMakeFiles/cmlformat.dir/xml/xml.o.d -o CMakeFiles/cmlformat.dir/xml/xml.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/xml/xml.cpp [ 34%] Linking CXX shared module ../../lib64/cmlformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/cmlformat.so CMakeFiles/cmlformat.dir/xml/cmlformat.o CMakeFiles/cmlformat.dir/xml/xml.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: -lm -ldl -lz -lcairo 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/yasaraformat.dir/yasaraformat.o -MF CMakeFiles/yasaraformat.dir/yasaraformat.o.d -o CMakeFiles/yasaraformat.dir/yasaraformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/yasaraformat.cpp [ 36%] Linking CXX shared module ../../lib64/yasaraformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/yasaraformat.dir/link.txt --verbose=1 /usr/bin/c++ 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module ../../lib64/viewmolformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/viewmolformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/viewmolformat.so CMakeFiles/viewmolformat.dir/viewmolformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 36%] Built target viewmolformat make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/depend make[2]: Entering directory 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src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 37%] Building CXX object src/formats/CMakeFiles/pointcloudformat.dir/pointcloudformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpointcloudformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/pointcloudformat.dir/pointcloudformat.o -MF CMakeFiles/pointcloudformat.dir/pointcloudformat.o.d -o CMakeFiles/pointcloudformat.dir/pointcloudformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/pointcloudformat.cpp [ 38%] Linking CXX shared module ../../lib64/pointcloudformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pointcloudformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/pointcloudformat.so CMakeFiles/pointcloudformat.dir/pointcloudformat.o 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/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 38%] Building CXX object src/formats/CMakeFiles/msiformat.dir/msiformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmsiformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/msiformat.dir/msiformat.o -MF CMakeFiles/msiformat.dir/msiformat.o.d -o CMakeFiles/msiformat.dir/msiformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/msiformat.cpp [ 38%] Linking CXX shared module ../../lib64/msiformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msiformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/mpqcformat.dir/mpqcformat.o -MF CMakeFiles/mpqcformat.dir/mpqcformat.o.d -o CMakeFiles/mpqcformat.dir/mpqcformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/mpqcformat.cpp [ 39%] Linking CXX shared module ../../lib64/mpqcformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpqcformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/mpqcformat.so CMakeFiles/mpqcformat.dir/mpqcformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 39%] Built target mpqcformat make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/pdbqtformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 40%] Building CXX object src/formats/CMakeFiles/pdbqtformat.dir/pdbqtformat.o cd 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src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/lpmdformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/build make[2]: Entering directory 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-isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/msmsformat.dir/msmsformat.o -MF CMakeFiles/msmsformat.dir/msmsformat.o.d -o CMakeFiles/msmsformat.dir/msmsformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/msmsformat.cpp [ 42%] Linking CXX shared module ../../lib64/msmsformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msmsformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/msmsformat.so CMakeFiles/msmsformat.dir/msmsformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 42%] Built target msmsformat make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/lmpdatformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 42%] Building CXX object src/formats/CMakeFiles/lmpdatformat.dir/lmpdatformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dlmpdatformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo 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'/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 43%] Building CXX object src/formats/CMakeFiles/fpsformat.dir/fpsformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dfpsformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/fpsformat.dir/fpsformat.o -MF CMakeFiles/fpsformat.dir/fpsformat.o.d -o CMakeFiles/fpsformat.dir/fpsformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/fpsformat.cpp [ 44%] Linking CXX shared module ../../lib64/fpsformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpsformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/fpsformat.so CMakeFiles/fpsformat.dir/fpsformat.o 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.o -MF CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.o.d -o CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/json/chemdoodlejsonformat.cpp [ 45%] Building CXX object src/formats/CMakeFiles/chemdoodlejsonformat.dir/json/jsoncpp.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dchemdoodlejsonformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/chemdoodlejsonformat.dir/json/jsoncpp.o -MF CMakeFiles/chemdoodlejsonformat.dir/json/jsoncpp.o.d -o CMakeFiles/chemdoodlejsonformat.dir/json/jsoncpp.o -c 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/fhformat.dir/fhformat.o -MF CMakeFiles/fhformat.dir/fhformat.o.d -o CMakeFiles/fhformat.dir/fhformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/fhformat.cpp [ 45%] Linking CXX shared module ../../lib64/fhformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags 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-Dfingerprintformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/fingerprintformat.dir/fingerprintformat.o -MF CMakeFiles/fingerprintformat.dir/fingerprintformat.o.d -o CMakeFiles/fingerprintformat.dir/fingerprintformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/fingerprintformat.cpp [ 45%] Linking CXX shared module ../../lib64/fingerprintformat.so cd 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/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 45%] Building CXX object src/formats/CMakeFiles/featformat.dir/featformat.o cd 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/fastsearchformat.dir/fastsearchformat.o -MF CMakeFiles/fastsearchformat.dir/fastsearchformat.o.d -o CMakeFiles/fastsearchformat.dir/fastsearchformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/fastsearchformat.cpp [ 46%] Linking CXX shared module ../../lib64/fastsearchformat.so cd 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-isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/cssrformat.dir/cssrformat.o -MF CMakeFiles/cssrformat.dir/cssrformat.o.d -o CMakeFiles/cssrformat.dir/cssrformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/cssrformat.cpp [ 47%] Linking CXX shared module ../../lib64/cssrformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cssrformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/cssrformat.so CMakeFiles/cssrformat.dir/cssrformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 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'/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 48%] Building CXX object src/formats/CMakeFiles/cifformat.dir/cifformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcifformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/cifformat.dir/cifformat.o -MF CMakeFiles/cifformat.dir/cifformat.o.d -o CMakeFiles/cifformat.dir/cifformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/cifformat.cpp [ 48%] Linking CXX shared module ../../lib64/cifformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cifformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/cifformat.so CMakeFiles/cifformat.dir/cifformat.o 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/turbomoleformat.dir/turbomoleformat.o -MF CMakeFiles/turbomoleformat.dir/turbomoleformat.o.d -o CMakeFiles/turbomoleformat.dir/turbomoleformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/turbomoleformat.cpp [ 58%] Linking CXX shared module ../../lib64/turbomoleformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/turbomoleformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/turbomoleformat.so CMakeFiles/turbomoleformat.dir/turbomoleformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 58%] Built target turbomoleformat make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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../../lib64/gamessformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/gamessformat.so CMakeFiles/gamessformat.dir/gamessformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 58%] Built target gamessformat make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 58%] Building CXX object src/formats/CMakeFiles/PQSformat.dir/PQSformat.o cd 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src/formats/CMakeFiles/mdlformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/mdlformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 58%] Building CXX object src/formats/CMakeFiles/mdlformat.dir/mdlformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmdlformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/mdlformat.dir/mdlformat.o -MF CMakeFiles/mdlformat.dir/mdlformat.o.d -o CMakeFiles/mdlformat.dir/mdlformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/mdlformat.cpp [ 58%] Linking CXX shared module ../../lib64/mdlformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/mdlformat.so CMakeFiles/mdlformat.dir/mdlformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 58%] Built target mdlformat make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 58%] Building CXX object src/formats/CMakeFiles/pngformat.dir/pngformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpngformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC 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/usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/inchiformat.dir/inchiformat.o -MF CMakeFiles/inchiformat.dir/inchiformat.o.d -o CMakeFiles/inchiformat.dir/inchiformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/inchiformat.cpp [ 60%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/getinchi.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dinchiformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data 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src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 60%] Building CXX object src/formats/CMakeFiles/nwchemformat.dir/nwchemformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dnwchemformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/nwchemformat.dir/nwchemformat.o -MF CMakeFiles/nwchemformat.dir/nwchemformat.o.d -o CMakeFiles/nwchemformat.dir/nwchemformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/nwchemformat.cpp [ 60%] Linking CXX shared module ../../lib64/nwchemformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nwchemformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/nwchemformat.so CMakeFiles/nwchemformat.dir/nwchemformat.o 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/molreport.dir/molreport.o -MF CMakeFiles/molreport.dir/molreport.o.d -o CMakeFiles/molreport.dir/molreport.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/molreport.cpp [ 61%] Linking CXX shared module ../../lib64/molreport.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molreport.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags 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/usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/rxnformat.dir/rxnformat.o -MF CMakeFiles/rxnformat.dir/rxnformat.o.d -o CMakeFiles/rxnformat.dir/rxnformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/rxnformat.cpp [ 65%] Linking CXX shared module ../../lib64/rxnformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rxnformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/rxnformat.so CMakeFiles/rxnformat.dir/rxnformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 65%] Built target rxnformat make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/alchemyformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 65%] Building CXX object src/formats/CMakeFiles/alchemyformat.dir/alchemyformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dalchemyformat_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/alchemyformat.dir/alchemyformat.o -MF CMakeFiles/alchemyformat.dir/alchemyformat.o.d -o CMakeFiles/alchemyformat.dir/alchemyformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/alchemyformat.cpp [ 65%] Linking CXX shared module ../../lib64/alchemyformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/alchemyformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/alchemyformat.so CMakeFiles/alchemyformat.dir/alchemyformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 65%] Built target alchemyformat make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/castepformat.dir/castepformat.o -MF CMakeFiles/castepformat.dir/castepformat.o.d -o CMakeFiles/castepformat.dir/castepformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/castepformat.cpp [ 66%] Linking CXX shared module ../../lib64/castepformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/castepformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/castepformat.so CMakeFiles/castepformat.dir/castepformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 66%] Built target castepformat make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 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/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 67%] Building CXX object src/formats/CMakeFiles/mpdformat.dir/mpdformat.o cd 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'/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 68%] Building CXX object src/formats/CMakeFiles/mol2format.dir/mol2format.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmol2format_EXPORTS -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC 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'/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 69%] Built target mol2format make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/jaguarformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f 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/usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/jaguarformat.dir/jaguarformat.o -MF CMakeFiles/jaguarformat.dir/jaguarformat.o.d -o CMakeFiles/jaguarformat.dir/jaguarformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/jaguarformat.cpp [ 70%] Linking CXX shared module ../../lib64/jaguarformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/jaguarformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/jaguarformat.so CMakeFiles/jaguarformat.dir/jaguarformat.o 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/xyzformat.dir/xyzformat.o -MF CMakeFiles/xyzformat.dir/xyzformat.o.d -o CMakeFiles/xyzformat.dir/xyzformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/xyzformat.cpp [ 71%] Linking CXX shared module ../../lib64/xyzformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xyzformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/mopacformat.dir/mopacformat.o -MF CMakeFiles/mopacformat.dir/mopacformat.o.d -o CMakeFiles/mopacformat.dir/mopacformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/mopacformat.cpp [ 71%] Linking CXX shared module ../../lib64/mopacformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mopacformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/mopacformat.so CMakeFiles/mopacformat.dir/mopacformat.o -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 71%] Built target mopacformat make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 71%] Building CXX object src/formats/CMakeFiles/moldenformat.dir/moldenformat.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ 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/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 71%] Building CXX object src/formats/CMakeFiles/CSRformat.dir/CSRformat.o cd 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/orcaformat.dir/orcaformat.o -MF CMakeFiles/orcaformat.dir/orcaformat.o.d -o CMakeFiles/orcaformat.dir/orcaformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/orcaformat.cpp [ 75%] Linking CXX shared module ../../lib64/orcaformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/orcaformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags 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-I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/formats/CMakeFiles/molproformat.dir/molproformat.o -MF CMakeFiles/molproformat.dir/molproformat.o.d -o CMakeFiles/molproformat.dir/molproformat.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/molproformat.cpp [ 75%] Linking CXX shared module ../../lib64/molproformat.so cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats && /usr/bin/cmake -E 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/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 76%] Building CXX object src/formats/CMakeFiles/balstformat.dir/balstformat.o cd 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/usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT tools/CMakeFiles/obrotamer.dir/obrotamer.o -MF CMakeFiles/obrotamer.dir/obrotamer.o.d -o CMakeFiles/obrotamer.dir/obrotamer.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/tools/obrotamer.cpp [ 81%] Linking CXX executable ../bin/obrotamer cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotamer.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/obrotamer.dir/obrotamer.o -o ../bin/obrotamer -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: 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-D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/. -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/GUI/CMakeFiles/obgui.dir/stdwx.o -MF CMakeFiles/obgui.dir/stdwx.o.d -o CMakeFiles/obgui.dir/stdwx.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/stdwx.cpp [ 87%] Building CXX object src/GUI/CMakeFiles/obgui.dir/optswx.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/. -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -MD -MT src/GUI/CMakeFiles/obgui.dir/optswx.o -MF CMakeFiles/obgui.dir/optswx.o.d -o CMakeFiles/obgui.dir/optswx.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/optswx.cpp /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/optswx.cpp: In member function ‘char* DynOptionswx::strcasestr(const char*, const char*)’: /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/optswx.cpp:394:27: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 394 | register unsigned char *h, *n, *hc, *nc; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/optswx.cpp:394:31: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 394 | register unsigned char *h, *n, *hc, *nc; | ^ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/optswx.cpp:394:35: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 394 | register unsigned char *h, *n, *hc, *nc; | ^~ /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/GUI/optswx.cpp:394:40: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 394 | register unsigned char *h, *n, *hc, *nc; | ^~ [ 87%] Linking CXX executable ../../bin/obgui cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/src/GUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgui.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/obgui.dir/OBGUI.o CMakeFiles/obgui.dir/stdwx.o CMakeFiles/obgui.dir/optswx.o -o ../../bin/obgui -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: ../../lib64/libopenbabel.so.5.0.0 -L/usr/lib64 -pthread -L/usr/X11R6/lib64 -lwx_baseu-2.8 -lwx_gtk2u_core-2.8 -lwx_gtk2u_adv-2.8 -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 87%] Built target obgui make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test/CMakeFiles/roundtrip.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 87%] Building CXX object test/CMakeFiles/roundtrip.dir/roundtrip.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/roundtrip.dir/roundtrip.o -MF CMakeFiles/roundtrip.dir/roundtrip.o.d -o CMakeFiles/roundtrip.dir/roundtrip.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/roundtrip.cpp [ 88%] Linking CXX executable ../bin/roundtrip cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/roundtrip.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/roundtrip.dir/roundtrip.o -o ../bin/roundtrip -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64: ../lib64/libopenbabel.so.5.0.0 -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 88%] Built target roundtrip make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test/CMakeFiles/test_inchiwrite.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 88%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/inchiwrite.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_inchiwrite.dir/inchiwrite.o -MF CMakeFiles/test_inchiwrite.dir/inchiwrite.o.d -o CMakeFiles/test_inchiwrite.dir/inchiwrite.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/inchiwrite.cpp [ 88%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o -MF CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o.d -o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/src/formats/getinchi.cpp [ 88%] Linking CXX executable ../bin/test_inchiwrite cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_inchiwrite.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/test_inchiwrite.dir/inchiwrite.o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o -o ../bin/test_inchiwrite -Wl,-rpath,/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64 ../lib64/libopenbabel.so.5.0.0 -lm -ldl -lz make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 88%] Built target test_inchiwrite make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/depend make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1 /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test/CMakeFiles/test_runner.dir/DependInfo.cmake --color= make[2]: Leaving directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/build make[2]: Entering directory '/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build' [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/test_runner.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/test_runner.o -MF CMakeFiles/test_runner.dir/test_runner.o.d -o CMakeFiles/test_runner.dir/test_runner.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test/test_runner.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/aligntest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/aligntest.o -MF CMakeFiles/test_runner.dir/aligntest.o.d -o CMakeFiles/test_runner.dir/aligntest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/aligntest.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/automorphismtest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/automorphismtest.o -MF CMakeFiles/test_runner.dir/automorphismtest.o.d -o CMakeFiles/test_runner.dir/automorphismtest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/automorphismtest.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/buildertest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/buildertest.o -MF CMakeFiles/test_runner.dir/buildertest.o.d -o CMakeFiles/test_runner.dir/buildertest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/buildertest.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/canonconsistenttest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/canonconsistenttest.o -MF CMakeFiles/test_runner.dir/canonconsistenttest.o.d -o CMakeFiles/test_runner.dir/canonconsistenttest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/canonconsistenttest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/canonstabletest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/canonstabletest.o -MF CMakeFiles/test_runner.dir/canonstabletest.o.d -o CMakeFiles/test_runner.dir/canonstabletest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/canonstabletest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/carspacegrouptest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/carspacegrouptest.o -MF CMakeFiles/test_runner.dir/carspacegrouptest.o.d -o CMakeFiles/test_runner.dir/carspacegrouptest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/carspacegrouptest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/cifspacegrouptest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/cifspacegrouptest.o -MF CMakeFiles/test_runner.dir/cifspacegrouptest.o.d -o CMakeFiles/test_runner.dir/cifspacegrouptest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/cifspacegrouptest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/cistranstest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/cistranstest.o -MF CMakeFiles/test_runner.dir/cistranstest.o.d -o CMakeFiles/test_runner.dir/cistranstest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/cistranstest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/graphsymtest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/graphsymtest.o -MF CMakeFiles/test_runner.dir/graphsymtest.o.d -o CMakeFiles/test_runner.dir/graphsymtest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/graphsymtest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/gziptest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/gziptest.o -MF CMakeFiles/test_runner.dir/gziptest.o.d -o CMakeFiles/test_runner.dir/gziptest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/gziptest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/implicitHtest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/implicitHtest.o -MF CMakeFiles/test_runner.dir/implicitHtest.o.d -o CMakeFiles/test_runner.dir/implicitHtest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/implicitHtest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/lssrtest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/lssrtest.o -MF CMakeFiles/test_runner.dir/lssrtest.o.d -o CMakeFiles/test_runner.dir/lssrtest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/lssrtest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/isomorphismtest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/isomorphismtest.o -MF CMakeFiles/test_runner.dir/isomorphismtest.o.d -o CMakeFiles/test_runner.dir/isomorphismtest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/isomorphismtest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/multicmltest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/multicmltest.o -MF CMakeFiles/test_runner.dir/multicmltest.o.d -o CMakeFiles/test_runner.dir/multicmltest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/multicmltest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/regressionstest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/regressionstest.o -MF CMakeFiles/test_runner.dir/regressionstest.o.d -o CMakeFiles/test_runner.dir/regressionstest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/regressionstest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/rotortest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/rotortest.o -MF CMakeFiles/test_runner.dir/rotortest.o.d -o CMakeFiles/test_runner.dir/rotortest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/rotortest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/shuffletest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/shuffletest.o -MF CMakeFiles/test_runner.dir/shuffletest.o.d -o CMakeFiles/test_runner.dir/shuffletest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/shuffletest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/smilestest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/smilestest.o -MF CMakeFiles/test_runner.dir/smilestest.o.d -o CMakeFiles/test_runner.dir/smilestest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/smilestest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/spectrophoretest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/spectrophoretest.o -MF CMakeFiles/test_runner.dir/spectrophoretest.o.d -o CMakeFiles/test_runner.dir/spectrophoretest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/spectrophoretest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/squareplanartest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/squareplanartest.o -MF CMakeFiles/test_runner.dir/squareplanartest.o.d -o CMakeFiles/test_runner.dir/squareplanartest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/squareplanartest.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/stereotest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/stereotest.o -MF CMakeFiles/test_runner.dir/stereotest.o.d -o CMakeFiles/test_runner.dir/stereotest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/stereotest.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/stereoperceptiontest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/stereoperceptiontest.o -MF CMakeFiles/test_runner.dir/stereoperceptiontest.o.d -o CMakeFiles/test_runner.dir/stereoperceptiontest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/stereoperceptiontest.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/tautomertest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/tautomertest.o -MF CMakeFiles/test_runner.dir/tautomertest.o.d -o CMakeFiles/test_runner.dir/tautomertest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/tautomertest.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/tetrahedraltest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/tetrahedraltest.o -MF CMakeFiles/test_runner.dir/tetrahedraltest.o.d -o CMakeFiles/test_runner.dir/tetrahedraltest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/tetrahedraltest.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/tetranonplanartest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/tetranonplanartest.o -MF CMakeFiles/test_runner.dir/tetranonplanartest.o.d -o CMakeFiles/test_runner.dir/tetranonplanartest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/tetranonplanartest.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/tetraplanartest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/tetraplanartest.o -MF CMakeFiles/test_runner.dir/tetraplanartest.o.d -o CMakeFiles/test_runner.dir/tetraplanartest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/tetraplanartest.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/uniqueidtest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/uniqueidtest.o -MF CMakeFiles/test_runner.dir/uniqueidtest.o.d -o CMakeFiles/test_runner.dir/uniqueidtest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/uniqueidtest.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/aromatest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/aromatest.o -MF CMakeFiles/test_runner.dir/aromatest.o.d -o CMakeFiles/test_runner.dir/aromatest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/aromatest.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/atom.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/atom.o -MF CMakeFiles/test_runner.dir/atom.o.d -o CMakeFiles/test_runner.dir/atom.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/atom.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/bond.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/bond.o -MF CMakeFiles/test_runner.dir/bond.o.d -o CMakeFiles/test_runner.dir/bond.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/bond.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/cansmi.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/cansmi.o -MF CMakeFiles/test_runner.dir/cansmi.o.d -o CMakeFiles/test_runner.dir/cansmi.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/cansmi.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/charge_mmff94.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/charge_mmff94.o -MF CMakeFiles/test_runner.dir/charge_mmff94.o.d -o CMakeFiles/test_runner.dir/charge_mmff94.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/charge_mmff94.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/charge_gasteiger.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/charge_gasteiger.o -MF CMakeFiles/test_runner.dir/charge_gasteiger.o.d -o CMakeFiles/test_runner.dir/charge_gasteiger.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/charge_gasteiger.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/conversion.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/conversion.o -MF CMakeFiles/test_runner.dir/conversion.o.d -o CMakeFiles/test_runner.dir/conversion.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/conversion.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/datatest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/datatest.o -MF CMakeFiles/test_runner.dir/datatest.o.d -o CMakeFiles/test_runner.dir/datatest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/datatest.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/ffgaff.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/ffgaff.o -MF CMakeFiles/test_runner.dir/ffgaff.o.d -o CMakeFiles/test_runner.dir/ffgaff.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/ffgaff.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/ffghemical.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/ffghemical.o -MF CMakeFiles/test_runner.dir/ffghemical.o.d -o CMakeFiles/test_runner.dir/ffghemical.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/ffghemical.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/ffmmff94.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/ffmmff94.o -MF CMakeFiles/test_runner.dir/ffmmff94.o.d -o CMakeFiles/test_runner.dir/ffmmff94.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/ffmmff94.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/ffuff.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/ffuff.o -MF CMakeFiles/test_runner.dir/ffuff.o.d -o CMakeFiles/test_runner.dir/ffuff.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/ffuff.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/formalcharge.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/formalcharge.o -MF CMakeFiles/test_runner.dir/formalcharge.o.d -o CMakeFiles/test_runner.dir/formalcharge.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/formalcharge.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/format.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/format.o -MF CMakeFiles/test_runner.dir/format.o.d -o CMakeFiles/test_runner.dir/format.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/format.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/formula.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/formula.o -MF CMakeFiles/test_runner.dir/formula.o.d -o CMakeFiles/test_runner.dir/formula.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/formula.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/internalcoord.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/internalcoord.o -MF CMakeFiles/test_runner.dir/internalcoord.o.d -o CMakeFiles/test_runner.dir/internalcoord.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/internalcoord.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmarts.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/invalidsmarts.o -MF CMakeFiles/test_runner.dir/invalidsmarts.o.d -o CMakeFiles/test_runner.dir/invalidsmarts.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/invalidsmarts.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmiles.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/invalidsmiles.o -MF CMakeFiles/test_runner.dir/invalidsmiles.o.d -o CMakeFiles/test_runner.dir/invalidsmiles.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/invalidsmiles.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/iterators.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/iterators.o -MF CMakeFiles/test_runner.dir/iterators.o.d -o CMakeFiles/test_runner.dir/iterators.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/iterators.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/logp_psa.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/logp_psa.o -MF CMakeFiles/test_runner.dir/logp_psa.o.d -o CMakeFiles/test_runner.dir/logp_psa.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/logp_psa.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/math.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/math.o -MF CMakeFiles/test_runner.dir/math.o.d -o CMakeFiles/test_runner.dir/math.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/math.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/mol.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/mol.o -MF CMakeFiles/test_runner.dir/mol.o.d -o CMakeFiles/test_runner.dir/mol.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/mol.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/phmodel.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/phmodel.o -MF CMakeFiles/test_runner.dir/phmodel.o.d -o CMakeFiles/test_runner.dir/phmodel.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/phmodel.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/residue.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/residue.o -MF CMakeFiles/test_runner.dir/residue.o.d -o CMakeFiles/test_runner.dir/residue.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/residue.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/ringtest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/ringtest.o -MF CMakeFiles/test_runner.dir/ringtest.o.d -o CMakeFiles/test_runner.dir/ringtest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/ringtest.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smartstest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/smartstest.o -MF CMakeFiles/test_runner.dir/smartstest.o.d -o CMakeFiles/test_runner.dir/smartstest.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/smartstest.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smartsparse.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/smartsparse.o -MF CMakeFiles/test_runner.dir/smartsparse.o.d -o CMakeFiles/test_runner.dir/smartsparse.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/smartsparse.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smilesmatch.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/smilesmatch.o -MF CMakeFiles/test_runner.dir/smilesmatch.o.d -o CMakeFiles/test_runner.dir/smilesmatch.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/smilesmatch.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/unitcell.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/unitcell.o -MF CMakeFiles/test_runner.dir/unitcell.o.d -o CMakeFiles/test_runner.dir/unitcell.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/unitcell.cpp [100%] Building CXX object test/CMakeFiles/test_runner.dir/cmlreadfile.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/cmlreadfile.o -MF CMakeFiles/test_runner.dir/cmlreadfile.o.d -o CMakeFiles/test_runner.dir/cmlreadfile.o -c /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/cmlreadfile.cpp [100%] Building CXX object test/CMakeFiles/test_runner.dir/obtest.o cd /usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/include -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/data -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/include -I/usr/include/eigen3 -I/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -O2 -fPIC -fpermissive -pthread -O3 -DNDEBUG -O2 -DNDEBUG -DOB_MODULE_PATH="\"/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test/files/\"" -DFORMATDIR="\"/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/build/lib64//\"" -DTESTDIR=/usr/src/slapt-src/libraries/openbabel/openbabel-openbabel-2-4-1/test -MD -MT test/CMakeFiles/test_runner.dir/obtest.o -MF CMakeFiles/test_runner.dir/obtest.o.d -o CMakeFiles/test_runner.dir/obtest.o -c 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plugin_fingerprints Consolidate compiler generated dependencies of target plugin_descriptors [ 24%] Built target plugin_descriptors Consolidate compiler generated dependencies of target inchi [ 32%] Built target inchi Consolidate compiler generated dependencies of target pubchemjsonformat [ 33%] Built target pubchemjsonformat Consolidate compiler generated dependencies of target cmlreactformat [ 34%] Built target cmlreactformat Consolidate compiler generated dependencies of target cmlformat [ 34%] Built target cmlformat Consolidate compiler generated dependencies of target cdxmlformat [ 35%] Built target cdxmlformat Consolidate compiler generated dependencies of target png2format [ 36%] Built target png2format Consolidate compiler generated dependencies of target rsmiformat [ 36%] Built target rsmiformat Consolidate compiler generated dependencies of target chemdrawcdx [ 36%] Built target chemdrawcdx Consolidate compiler generated dependencies of target yasaraformat [ 36%] Built target 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Consolidate compiler generated dependencies of target msmsformat [ 42%] Built target msmsformat Consolidate compiler generated dependencies of target lmpdatformat [ 42%] Built target lmpdatformat Consolidate compiler generated dependencies of target ghemicalformat [ 42%] Built target ghemicalformat Consolidate compiler generated dependencies of target smileyformat [ 42%] Built target smileyformat Consolidate compiler generated dependencies of target groformat [ 43%] Built target groformat Consolidate compiler generated dependencies of target freefracformat [ 43%] Built target freefracformat Consolidate compiler generated dependencies of target fpsformat [ 44%] Built target fpsformat Consolidate compiler generated dependencies of target chemdoodlejsonformat [ 45%] Built target chemdoodlejsonformat Consolidate compiler generated dependencies of target fhformat [ 45%] Built target fhformat Consolidate compiler generated dependencies of target fingerprintformat [ 45%] Built target 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dependencies of target orcaformat [ 75%] Built target orcaformat Consolidate compiler generated dependencies of target molproformat [ 75%] Built target molproformat Consolidate compiler generated dependencies of target MCDLformat [ 76%] Built target MCDLformat Consolidate compiler generated dependencies of target balstformat [ 76%] Built target balstformat Consolidate compiler generated dependencies of target acrformat [ 77%] Built target acrformat Consolidate compiler generated dependencies of target mdffformat [ 77%] Built target mdffformat Consolidate compiler generated dependencies of target dmolformat [ 77%] Built target dmolformat Consolidate compiler generated dependencies of target bgfformat [ 78%] Built target bgfformat Consolidate compiler generated dependencies of target cacaoformat [ 79%] Built target cacaoformat Consolidate compiler generated dependencies of target obgrep [ 79%] Built target obgrep Consolidate compiler generated dependencies of target obspectrophore [ 79%] Built target obspectrophore Consolidate compiler generated dependencies of target obrms [ 80%] Built target obrms Consolidate compiler generated dependencies of target obthermo [ 80%] Built target obthermo Consolidate compiler generated dependencies of target obtautomer [ 81%] Built target obtautomer Consolidate compiler generated dependencies of target babel [ 81%] Built target babel Consolidate compiler generated dependencies of target obrotamer [ 81%] Built target obrotamer Consolidate compiler generated dependencies of target obabel [ 82%] Built target obabel Consolidate compiler generated dependencies of target obminimize [ 83%] Built target obminimize Consolidate compiler generated dependencies of target obchiral [ 83%] Built target obchiral Consolidate compiler generated dependencies of target obdistgen [ 83%] Built target obdistgen Consolidate compiler generated dependencies of target obrotate [ 84%] Built target obrotate Consolidate compiler generated dependencies of target obenergy [ 84%] Built target obenergy Consolidate compiler generated dependencies of target obfit [ 85%] Built target obfit Consolidate compiler generated dependencies of target obprobe [ 85%] Built target obprobe Consolidate compiler generated dependencies of target obgen [ 85%] Built target obgen Consolidate compiler generated dependencies of target obprop [ 85%] Built target obprop Consolidate compiler generated dependencies of target obconformer [ 86%] Built target obconformer Consolidate compiler generated dependencies of target obsym [ 86%] Built target obsym Consolidate compiler generated dependencies of target obgui [ 87%] Built target obgui Consolidate compiler generated dependencies of target roundtrip [ 88%] Built target roundtrip Consolidate compiler generated dependencies of target test_inchiwrite [ 88%] Built target test_inchiwrite Consolidate compiler generated dependencies of target test_runner [100%] Built target test_runner Install the project... -- Install 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Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/mdlformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/mol2format.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/mol2format.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/pdbformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/pdbformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/inchiformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/inchiformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/asciiformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/asciiformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/copyformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/copyformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/MNAformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/MNAformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/molreport.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/molreport.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/nulformat.so -- Set 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Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/pngformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/pngformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/acesformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/acesformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/abinitformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/abinitformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/adfformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/adfformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/aoforceformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/aoforceformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/castepformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/castepformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/crystal09format.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/crystal09format.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/daltonformat.so -- Set runtime path of 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Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/mopacformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/mopacformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/nwchemformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/nwchemformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/pwscfformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/pwscfformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/qchemformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/qchemformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/siestaformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/siestaformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/turbomoleformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/turbomoleformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/vaspformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/vaspformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/xsfformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/xsfformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/zindoformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/zindoformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/gamessukformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/gamessukformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/orcaformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/orcaformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/APIInterface.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/APIInterface.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/CSRformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/CSRformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/PQSformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/PQSformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/MCDLformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/MCDLformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/alchemyformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/alchemyformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/acrformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/acrformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/amberformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/amberformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/balstformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/balstformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/bgfformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/bgfformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/boxformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/boxformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/cacaoformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/cacaoformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/cacheformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/cacheformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/carformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/carformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/cccformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/cccformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/chem3dformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/chem3dformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/chemdrawct.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/chemdrawct.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/chemtoolformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/chemtoolformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/cifformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/cifformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/crkformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/crkformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/cssrformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/cssrformat.so" to "/usr/lib64" -- 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to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/featformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/featformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/fhformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/fhformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/fingerprintformat.so -- Set runtime path of "/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/fingerprintformat.so" to "/usr/lib64" -- Installing: /usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/lib64/openbabel/2.4.1/fpsformat.so -- Set runtime path of 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"/usr/src/slapt-src/libraries/openbabel/package-openbabel/usr/bin/roundtrip" to "/usr/lib64" Slackware package maker, version 3.14159265. Searching for symbolic links: usr/lib64/libinchi.so libinchi.so.0 usr/lib64/libinchi.so.0 libinchi.so.0.4.1 usr/lib64/libopenbabel.so libopenbabel.so.5 usr/lib64/libopenbabel.so.5 libopenbabel.so.5.0.0 Making symbolic link creation script: ( cd usr/lib64 ; rm -rf libinchi.so ) ( cd usr/lib64 ; ln -sf libinchi.so.0 libinchi.so ) ( cd usr/lib64 ; rm -rf libinchi.so.0 ) ( cd usr/lib64 ; ln -sf libinchi.so.0.4.1 libinchi.so.0 ) ( cd usr/lib64 ; rm -rf libopenbabel.so ) ( cd usr/lib64 ; ln -sf libopenbabel.so.5 libopenbabel.so ) ( cd usr/lib64 ; rm -rf libopenbabel.so.5 ) ( cd usr/lib64 ; ln -sf libopenbabel.so.5.0.0 libopenbabel.so.5 ) It is recommended that you make these lines your new installation script. 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Would you like to reset all directory permissions to 755 (drwxr-xr-x) and directory ownerships to root.root ([y]es, [n]o)? n Creating Slackware package: /usr/src/slapt-src/libraries/openbabel/openbabel-2.4.1-x86_64-1salix15.0.txz ./ install/ install/doinst.sh install/slack-desc usr/ usr/bin/ usr/bin/babel usr/bin/obabel usr/bin/obchiral usr/bin/obconformer usr/bin/obdistgen usr/bin/obenergy usr/bin/obfit usr/bin/obgen usr/bin/obgrep usr/bin/obgui usr/bin/obminimize usr/bin/obprobe usr/bin/obprop usr/bin/obrms usr/bin/obrotamer usr/bin/obrotate usr/bin/obspectrophore usr/bin/obsym usr/bin/obtautomer usr/bin/obthermo usr/bin/roundtrip usr/doc/ usr/doc/openbabel-2.4.1/ usr/doc/openbabel-2.4.1/AUTHORS usr/doc/openbabel-2.4.1/COPYING usr/doc/openbabel-2.4.1/FAQ.html usr/doc/openbabel-2.4.1/NEWS.md usr/doc/openbabel-2.4.1/OBTwoMigration.html usr/doc/openbabel-2.4.1/OpenBabelGUI.html usr/doc/openbabel-2.4.1/README.md usr/doc/openbabel-2.4.1/THANKS usr/doc/openbabel-2.4.1/api-footer.html 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Installing package openbabel-2.4.1-x86_64-1salix15.0... | openbabel (Open Babel 3D Library) | | Open Babel is a project designed to pick up where Babel left off, | as a cross-platform program and library designed to interconvert | between many file formats used in molecular modeling, computational | chemistry, and many related areas. | | Homepage: http://openbabel.sourceforge.net/wiki/Main_Page | | | | |